Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03371

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,545,751	+		CCNA_03369	0.49	-1.0
3,545,761	+		CCNA_03369	0.51	+0.7
3,545,761	+		CCNA_03369	0.51	+0.4
3,545,761	+		CCNA_03369	0.51	-0.1
3,545,770	+		CCNA_03369	0.53	-1.4
3,545,776	-		CCNA_03369	0.54	+1.1
3,545,795	-		CCNA_03369	0.57	+3.9
3,545,805	-		CCNA_03369	0.59	+2.1
3,545,828	-		CCNA_03369	0.63	+0.7
3,545,828	-		CCNA_03369	0.63	+0.6
3,545,852	+		CCNA_03369	0.67	-2.0
3,545,852	+		CCNA_03369	0.67	-0.0
3,545,890	+		CCNA_03369	0.73	+2.4
3,545,923	+		CCNA_03369	0.79	+0.6
3,545,923	+		CCNA_03369	0.79	+0.4
3,545,931	-		CCNA_03369	0.81	+0.0
3,545,931	-		CCNA_03369	0.81	-0.2
3,545,931	-		CCNA_03369	0.81	+0.0
3,545,931	-		CCNA_03369	0.81	+0.4
3,545,974	-		CCNA_03369	0.88	+1.1
3,546,066	+				-0.1
3,546,066	+				+0.6
3,546,066	+				-1.9
3,546,112	+				-0.5
3,546,112	+				+1.7
3,546,119	-				+0.3
3,546,120	-				-1.2
3,546,146	+				+0.1
3,546,154	-				-2.1
3,546,169	+				-1.2
3,546,177	-				+0.4
3,546,177	-				+1.7
3,546,178	-				+1.8
3,546,200	-				+1.0
3,546,304	-		CCNA_03370	0.19	-1.1
3,546,306	+		CCNA_03370	0.19	-0.6
3,546,327	+		CCNA_03370	0.23	+0.1
3,546,327	+		CCNA_03370	0.23	+0.3
3,546,328	+		CCNA_03370	0.23	+0.3
3,546,335	-		CCNA_03370	0.25	-1.8
3,546,335	-		CCNA_03370	0.25	-2.2
3,546,349	-		CCNA_03370	0.27	-0.5
3,546,362	-		CCNA_03370	0.30	-0.6
3,546,383	+		CCNA_03370	0.34	-0.2
3,546,405	-		CCNA_03370	0.38	+0.4
3,546,430	-		CCNA_03370	0.43	+1.1
3,546,432	+		CCNA_03370	0.43	-0.8
3,546,432	+		CCNA_03370	0.43	+2.2
3,546,440	-		CCNA_03370	0.45	+0.4
3,546,441	+		CCNA_03370	0.45	+1.4
3,546,448	+		CCNA_03370	0.46	+0.3
3,546,448	+		CCNA_03370	0.46	-0.7
3,546,456	-		CCNA_03370	0.48	-1.3
3,546,461	-		CCNA_03370	0.49	-0.6
3,546,461	-		CCNA_03370	0.49	-0.8
3,546,466	-		CCNA_03370	0.50	-2.8
3,546,501	+		CCNA_03370	0.56	-0.7
3,546,501	+		CCNA_03370	0.56	-0.8
3,546,509	-		CCNA_03370	0.58	+1.1
3,546,509	-		CCNA_03370	0.58	+0.5
3,546,509	-		CCNA_03370	0.58	-0.2
3,546,514	-		CCNA_03370	0.59	+0.6
3,546,535	+		CCNA_03370	0.63	+0.2
3,546,535	+		CCNA_03370	0.63	+2.0
3,546,543	-		CCNA_03370	0.64	+0.3
3,546,558	+		CCNA_03370	0.67	+1.1
3,546,621	-		CCNA_03370	0.79	+1.3
3,546,656	+		CCNA_03370	0.86	+0.7
3,546,809	+		CCNA_03371	0.17	+2.0
3,546,828	-		CCNA_03371	0.21	+2.3
3,546,860	+		CCNA_03371	0.28	+0.9
3,546,894	-		CCNA_03371	0.35	+3.1
3,546,907	-		CCNA_03371	0.38	+1.9
3,546,907	-		CCNA_03371	0.38	+3.2
3,546,908	+		CCNA_03371	0.38	-0.4
3,546,929	-		CCNA_03371	0.42	+2.0
3,546,983	-		CCNA_03371	0.54	+2.6
3,546,986	+		CCNA_03371	0.54	+0.7
3,546,993	+		CCNA_03371	0.56	+0.9
3,547,008	+		CCNA_03371	0.59	+0.2
3,547,031	-		CCNA_03371	0.64	+2.4
3,547,074	-		CCNA_03371	0.73	+1.9
3,547,130	+		CCNA_03371	0.84	-1.7
3,547,138	-		CCNA_03371	0.86	+2.1
3,547,138	-		CCNA_03371	0.86	+1.8
3,547,152	+		CCNA_03371	0.89	+1.1
3,547,163	-				+1.5
3,547,165	-				+2.1
3,547,167	+				-0.1
3,547,167	+				+1.4
3,547,175	-				+1.2
3,547,175	-				+1.6
3,547,211	+				+0.0
3,547,250	+				-1.2
3,547,255	+				+1.2
3,547,263	-				+2.6
3,547,263	-				+1.1
3,547,280	-				+2.0
3,547,352	-				+1.4
3,547,362	-				+2.9
3,547,362	-				+1.9
3,547,367	+				+2.4
3,547,367	+				+1.0
3,547,372	+				-1.4
3,547,375	-				+2.0
3,547,380	-		CCNA_03372	0.12	+2.4
3,547,399	+		CCNA_03372	0.23	+1.4
3,547,408	-		CCNA_03372	0.27	+2.0
3,547,434	+		CCNA_03372	0.41	-2.1
3,547,434	+		CCNA_03372	0.41	-0.6
3,547,442	-		CCNA_03372	0.46	+2.8
3,547,442	-		CCNA_03372	0.46	+2.7
3,547,494	-		CCNA_03372	0.74	+2.5
3,547,548	-				+2.2
3,547,658	+				-1.0
3,547,659	+				-0.5
3,547,666	-				-0.6