Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03259

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,428,349	+				+1.2
3,428,357	-				-1.6
3,428,361	+				+1.1
3,428,404	+		CCNA_03990	0.18	+1.6
3,428,412	-		CCNA_03990	0.42	-0.6
3,428,480	-				-0.7
3,428,480	-				+0.6
3,428,520	+		CCNA_03257	0.11	+1.2
3,428,575	+		CCNA_03257	0.22	+0.3
3,428,583	-		CCNA_03257	0.23	-0.3
3,428,616	+		CCNA_03257	0.29	+0.8
3,428,617	+		CCNA_03257	0.29	+3.5
3,428,635	-		CCNA_03257	0.33	+2.6
3,428,675	-		CCNA_03257	0.40	-0.1
3,428,689	-		CCNA_03257	0.43	-0.2
3,428,690	+		CCNA_03257	0.43	+1.4
3,428,700	+		CCNA_03257	0.45	+0.6
3,428,703	-		CCNA_03257	0.45	-1.1
3,428,746	-		CCNA_03257	0.53	+2.4
3,428,807	+		CCNA_03257	0.64	+1.9
3,428,818	+		CCNA_03257	0.66	+0.5
3,428,819	+		CCNA_03257	0.66	+1.1
3,428,857	-		CCNA_03257	0.73	+2.2
3,428,876	+		CCNA_03257	0.77	+1.3
3,428,984	-				+0.9
3,428,993	+				+1.3
3,429,002	+				+0.9
3,429,065	-				-0.6
3,429,085	-		CCNA_03258	0.15	-0.8
3,429,089	-		CCNA_03258	0.17	+1.9
3,429,098	+		CCNA_03258	0.20	-0.2
3,429,098	+		CCNA_03258	0.20	-1.0
3,429,100	-		CCNA_03258	0.21	-0.7
3,429,106	-		CCNA_03258	0.24	+0.1
3,429,106	-		CCNA_03258	0.24	-1.7
3,429,135	+		CCNA_03258	0.36	+2.1
3,429,143	-		CCNA_03258	0.39	+1.6
3,429,190	+		CCNA_03258	0.59	-1.5
3,429,206	+		CCNA_03258	0.65	+1.1
3,429,288	+				+1.2
3,429,373	+		CCNA_03259	0.19	-0.2
3,429,374	+		CCNA_03259	0.19	+0.4
3,429,382	-		CCNA_03259	0.21	-0.7
3,429,426	+		CCNA_03259	0.33	+0.1
3,429,435	-		CCNA_03259	0.35	+2.5
3,429,486	-		CCNA_03259	0.48	+1.4
3,429,494	+		CCNA_03259	0.51	-0.4
3,429,564	-		CCNA_03259	0.69	+2.3
3,429,575	-		CCNA_03259	0.72	+0.2
3,429,605	+		CCNA_03259	0.79	-0.0
3,429,605	+		CCNA_03259	0.79	+0.9
3,429,605	+		CCNA_03259	0.79	+0.2
3,429,605	+		CCNA_03259	0.79	+1.0
3,429,605	+		CCNA_03259	0.79	-0.6
3,429,605	+		CCNA_03259	0.79	-0.1
3,429,605	+		CCNA_03259	0.79	-1.4
3,429,605	+		CCNA_03259	0.79	-2.1
3,429,605	+		CCNA_03259	0.79	+0.9
3,429,605	+		CCNA_03259	0.79	+1.2
3,429,605	+		CCNA_03259	0.79	+2.6
3,429,605	+		CCNA_03259	0.79	+1.6
3,429,605	-		CCNA_03259	0.79	-1.4
3,429,613	-		CCNA_03259	0.82	+1.0
3,429,613	-		CCNA_03259	0.82	+0.3
3,429,613	-		CCNA_03259	0.82	+1.2
3,429,613	-		CCNA_03259	0.82	+2.2
3,429,613	-		CCNA_03259	0.82	-0.7
3,429,613	-		CCNA_03259	0.82	+1.7
3,429,613	-		CCNA_03259	0.82	+1.2
3,429,613	-		CCNA_03259	0.82	+2.0
3,429,613	-		CCNA_03259	0.82	+2.3
3,429,613	-				+2.6
3,429,613	-		CCNA_03259	0.82	+0.9
3,429,613	-		CCNA_03259	0.82	+1.7
3,429,613	-		CCNA_03259	0.82	+0.3
3,429,613	-		CCNA_03259	0.82	+1.2
3,429,613	-		CCNA_03259	0.82	+2.0
3,429,613	-		CCNA_03259	0.82	+2.0
3,429,613	-		CCNA_03259	0.82	+1.0
3,429,613	-		CCNA_03259	0.82	+2.4
3,429,613	-		CCNA_03259	0.82	+1.5
3,429,613	-		CCNA_03259	0.82	+1.3
3,429,613	-		CCNA_03259	0.82	+1.6
3,429,613	-		CCNA_03259	0.82	+1.2
3,429,613	-		CCNA_03259	0.82	+2.8
3,429,613	-		CCNA_03259	0.82	+2.9
3,429,613	-		CCNA_03259	0.82	+0.5
3,429,613	-		CCNA_03259	0.82	+0.9
3,429,613	-		CCNA_03259	0.82	+0.3
3,429,673	+				-1.7
3,429,704	-				+0.7
3,429,704	-				+1.6
3,429,723	-				-2.3
3,429,766	-		CCNA_03260	0.19	+0.5
3,429,827	-		CCNA_03260	0.36	-2.2
3,429,827	-		CCNA_03260	0.36	+0.3
3,429,855	-		CCNA_03260	0.43	-0.0
3,429,856	-		CCNA_03260	0.43	-0.5
3,429,951	-		CCNA_03260	0.69	+2.3
3,429,951	-		CCNA_03260	0.69	-1.0
3,429,951	-		CCNA_03260	0.69	-1.4
3,429,951	-		CCNA_03260	0.69	-0.4
3,430,060	+				+0.5
3,430,081	+				+1.5
3,430,090	-				+0.7
3,430,141	-				+1.4
3,430,254	+		CCNA_03261	0.19	+0.6
3,430,298	+		CCNA_03261	0.26	-0.2
3,430,298	+				+2.2
3,430,300	-		CCNA_03261	0.26	-1.2
3,430,368	+		CCNA_03261	0.37	-0.3
3,430,378	+		CCNA_03261	0.38	+0.1
3,430,386	-		CCNA_03261	0.40	+0.2
3,430,526	-		CCNA_03261	0.62	-0.3
3,430,563	-		CCNA_03261	0.68	+0.2
3,430,643	+		CCNA_03261	0.80	+1.0
3,430,656	-		CCNA_03261	0.82	-1.9