Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03178

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,336,710	+		CCNA_03177	0.62	-1.3
3,336,710	+		CCNA_03177	0.62	+0.7
3,336,717	+		CCNA_03177	0.63	+1.6
3,336,718	-		CCNA_03177	0.63	-0.8
3,336,735	+		CCNA_03177	0.63	+0.4
3,336,758	+		CCNA_03177	0.65	+0.6
3,336,766	-		CCNA_03177	0.65	+1.1
3,336,766	-		CCNA_03177	0.65	+0.7
3,336,781	+		CCNA_03177	0.66	+0.2
3,336,781	-		CCNA_03177	0.66	-1.3
3,336,813	-		CCNA_03177	0.67	-0.8
3,336,826	+		CCNA_03177	0.68	-0.7
3,336,856	+		CCNA_03177	0.70	-1.4
3,336,864	-		CCNA_03177	0.70	+2.5
3,336,865	-		CCNA_03177	0.70	+1.4
3,336,954	+		CCNA_03177	0.74	+0.5
3,337,000	+		CCNA_03177	0.77	-0.3
3,337,039	+		CCNA_03177	0.79	-0.5
3,337,058	+		CCNA_03177	0.80	+1.3
3,337,069	+		CCNA_03177	0.80	+1.7
3,337,072	-		CCNA_03177	0.80	+1.7
3,337,083	+		CCNA_03177	0.81	+0.9
3,337,091	-		CCNA_03177	0.81	-0.2
3,337,093	-		CCNA_03177	0.81	-0.6
3,337,139	-		CCNA_03177	0.84	+2.8
3,337,146	-		CCNA_03177	0.84	+1.9
3,337,281	+				-1.2
3,337,283	-				-0.6
3,337,347	-				+0.1
3,337,347	-				+1.0
3,337,347	-				+0.9
3,337,361	+				+0.2
3,337,369	-				+1.7
3,337,478	-				-0.2
3,337,582	+				+1.1
3,337,585	+				-0.4
3,337,619	+				-0.7
3,337,625	+				+1.9
3,337,632	+				+0.3
3,337,654	+				+2.7
3,337,671	+				+0.6
3,337,677	-				+0.8
3,337,679	-				+0.4
3,337,707	+				-0.7
3,337,707	+				-1.0
3,337,715	-				+0.7
3,337,721	+				+1.2
3,337,729	-				-0.7
3,337,747	-		CCNA_03178	0.10	+2.7
3,337,808	+		CCNA_03178	0.27	+1.3
3,337,808	+		CCNA_03178	0.27	+2.3
3,337,857	+		CCNA_03178	0.41	-0.8
3,337,857	+		CCNA_03178	0.41	+1.9
3,337,857	-		CCNA_03178	0.41	+1.2
3,337,881	-		CCNA_03178	0.48	+1.1
3,337,911	-		CCNA_03178	0.56	+0.2
3,337,911	-		CCNA_03178	0.56	+1.9
3,337,923	+		CCNA_03178	0.60	+0.5
3,338,003	-		CCNA_03178	0.82	+0.7
3,338,003	-		CCNA_03178	0.82	+1.0
3,338,008	-		CCNA_03178	0.83	-0.2
3,338,020	-		CCNA_03178	0.87	+1.6
3,338,033	-				-0.3
3,338,092	-				+0.0
3,338,119	+				+0.3
3,338,193	-				+1.1
3,338,193	-				+0.1
3,338,240	-				-1.2
3,338,271	+				-1.0
3,338,271	+				-1.0
3,338,271	+				-0.8
3,338,271	+				+1.3
3,338,271	+				+2.3
3,338,271	+				-0.3
3,338,279	-				-0.1
3,338,303	+		CCNA_03179	0.12	-0.4
3,338,362	+		CCNA_03179	0.16	+0.3
3,338,362	+		CCNA_03179	0.16	-1.1
3,338,386	+		CCNA_03179	0.18	+1.5
3,338,388	+		CCNA_03179	0.18	-0.8
3,338,396	+		CCNA_03179	0.19	+2.2
3,338,396	+		CCNA_03179	0.19	+0.9
3,338,396	+		CCNA_03179	0.19	+1.6
3,338,396	+		CCNA_03179	0.19	+2.7
3,338,396	+		CCNA_03179	0.19	+1.9
3,338,404	-		CCNA_03179	0.20	+0.6
3,338,404	-		CCNA_03179	0.20	+1.7
3,338,404	-		CCNA_03179	0.20	+0.1
3,338,404	-		CCNA_03179	0.20	+2.1
3,338,416	+		CCNA_03179	0.21	-1.6
3,338,423	-		CCNA_03179	0.21	+0.8
3,338,443	-		CCNA_03179	0.23	+0.3
3,338,493	-		CCNA_03179	0.27	-0.0
3,338,493	-		CCNA_03179	0.27	-1.3
3,338,493	-		CCNA_03179	0.27	-2.3
3,338,493	-		CCNA_03179	0.27	-1.2
3,338,503	-		CCNA_03179	0.27	-2.3
3,338,519	-		CCNA_03179	0.29	-0.9
3,338,545	-		CCNA_03179	0.31	+0.4
3,338,606	-		CCNA_03179	0.36	+0.0
3,338,619	-		CCNA_03179	0.37	-0.5
3,338,624	-		CCNA_03179	0.37	+1.5
3,338,624	-		CCNA_03179	0.37	+0.7
3,338,670	+		CCNA_03179	0.41	-0.9
3,338,670	+		CCNA_03179	0.41	+1.0
3,338,673	-		CCNA_03179	0.41	+1.5
3,338,680	+				+3.3
3,338,680	+		CCNA_03179	0.41	-0.3
3,338,687	+		CCNA_03179	0.42	+1.1
3,338,687	+		CCNA_03179	0.42	+0.9
3,338,695	-		CCNA_03179	0.42	-0.7
3,338,736	+		CCNA_03179	0.46	-0.3
3,338,760	-		CCNA_03179	0.48	-1.3
3,338,760	-		CCNA_03179	0.48	-1.1
3,338,784	+		CCNA_03179	0.49	+0.0
3,338,784	+		CCNA_03179	0.49	-1.3
3,338,784	+		CCNA_03179	0.49	+0.4
3,338,792	-		CCNA_03179	0.50	-0.2
3,338,841	-		CCNA_03179	0.54	-0.7
3,338,841	-				+1.5
3,338,891	-		CCNA_03179	0.58	-1.2
3,338,901	+		CCNA_03179	0.59	-0.1
3,338,914	+		CCNA_03179	0.60	-0.3
3,338,923	-		CCNA_03179	0.60	+0.8
3,338,923	-		CCNA_03179	0.60	+0.7
3,338,925	+		CCNA_03179	0.60	+1.6
3,338,934	+		CCNA_03179	0.61	+1.5
3,338,948	-		CCNA_03179	0.62	+1.3
3,338,963	+		CCNA_03179	0.63	-0.0
3,338,992	+		CCNA_03179	0.66	-0.6
3,339,002	+		CCNA_03179	0.67	+0.9
3,339,006	-		CCNA_03179	0.67	+0.6
3,339,019	+		CCNA_03179	0.68	-0.5