Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03136

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,283,147	+		CCNA_03135	0.25	-1.2
3,283,160	+		CCNA_03135	0.26	+1.1
3,283,160	+		CCNA_03135	0.26	+1.0
3,283,175	-		CCNA_03135	0.27	+1.4
3,283,228	+		CCNA_03135	0.31	+0.3
3,283,236	-		CCNA_03135	0.32	-0.9
3,283,236	-		CCNA_03135	0.32	+0.9
3,283,240	-		CCNA_03135	0.32	+0.8
3,283,291	-		CCNA_03135	0.36	+1.0
3,283,328	+		CCNA_03135	0.39	-1.0
3,283,340	+		CCNA_03135	0.40	-0.0
3,283,340	+		CCNA_03135	0.40	+1.1
3,283,340	+		CCNA_03135	0.40	+1.4
3,283,343	-		CCNA_03135	0.40	+0.6
3,283,348	-		CCNA_03135	0.40	-0.2
3,283,348	-		CCNA_03135	0.40	-0.8
3,283,391	+		CCNA_03135	0.44	+1.3
3,283,427	+		CCNA_03135	0.46	+0.7
3,283,437	+		CCNA_03135	0.47	+2.1
3,283,437	+		CCNA_03135	0.47	+0.6
3,283,440	-		CCNA_03135	0.47	+0.6
3,283,445	-		CCNA_03135	0.48	+2.4
3,283,482	+		CCNA_03135	0.50	+1.2
3,283,482	+		CCNA_03135	0.50	-0.6
3,283,511	-		CCNA_03135	0.53	+0.5
3,283,512	+		CCNA_03135	0.53	-0.0
3,283,544	+		CCNA_03135	0.55	+0.8
3,283,544	+		CCNA_03135	0.55	-0.3
3,283,544	+		CCNA_03135	0.55	-0.7
3,283,562	-		CCNA_03135	0.56	+1.6
3,283,588	+		CCNA_03135	0.58	+0.1
3,283,598	+		CCNA_03135	0.59	+1.6
3,283,640	+		CCNA_03135	0.62	+1.4
3,283,643	+		CCNA_03135	0.62	-0.9
3,283,648	-		CCNA_03135	0.63	-1.4
3,283,670	+		CCNA_03135	0.64	-0.4
3,283,682	+		CCNA_03135	0.65	+0.8
3,283,685	-		CCNA_03135	0.66	+1.1
3,283,740	+		CCNA_03135	0.70	+1.2
3,283,740	+		CCNA_03135	0.70	+2.0
3,283,747	+		CCNA_03135	0.70	-0.4
3,283,750	-		CCNA_03135	0.70	-0.7
3,283,752	+		CCNA_03135	0.71	-0.1
3,283,806	+		CCNA_03135	0.75	-1.9
3,283,814	-		CCNA_03135	0.75	-0.5
3,283,835	+		CCNA_03135	0.77	+0.1
3,283,843	-		CCNA_03135	0.77	-0.0
3,283,843	-		CCNA_03135	0.77	-1.9
3,283,977	+		CCNA_03135	0.87	-0.8
3,284,032	+				-1.4
3,284,056	+				+1.4
3,284,072	+				+0.9
3,284,072	+				-0.3
3,284,072	+				+0.5
3,284,080	-				-0.0
3,284,127	+				+2.6
3,284,160	-				+0.7
3,284,199	-		CCNA_03136	0.12	+0.8
3,284,233	+		CCNA_03136	0.20	+2.1
3,284,295	-		CCNA_03136	0.35	+1.1
3,284,308	+		CCNA_03136	0.38	+2.0
3,284,419	+		CCNA_03136	0.65	+2.8
3,284,425	+		CCNA_03136	0.66	+1.2
3,284,473	+		CCNA_03136	0.78	+1.2
3,284,473	+		CCNA_03136	0.78	+1.5
3,284,473	+		CCNA_03136	0.78	+2.0
3,284,479	+		CCNA_03136	0.79	+1.8
3,284,605	+				+1.5
3,284,605	-				-1.5
3,284,634	+				-0.8
3,284,634	+				+1.1
3,284,634	+				+0.8
3,284,634	+				+0.5
3,284,634	-				-0.2
3,284,661	+				+0.9
3,284,685	-		CCNA_03137	0.11	-1.2
3,284,757	+		CCNA_03137	0.18	+1.2
3,284,762	+		CCNA_03137	0.18	+1.9
3,284,789	+				+1.7
3,284,798	-		CCNA_03137	0.22	-1.0
3,284,807	-		CCNA_03137	0.23	-1.8
3,284,807	-		CCNA_03137	0.23	-0.0
3,284,831	+		CCNA_03137	0.25	+0.8
3,284,866	+		CCNA_03137	0.28	+2.4
3,284,874	-		CCNA_03137	0.29	+2.2
3,284,881	+		CCNA_03137	0.30	+0.3
3,284,881	+		CCNA_03137	0.30	+0.4
3,284,881	+		CCNA_03137	0.30	-1.2
3,284,886	+		CCNA_03137	0.30	+1.4
3,284,889	-		CCNA_03137	0.30	+0.9
3,284,900	-		CCNA_03137	0.31	-0.8
3,284,900	-		CCNA_03137	0.31	-0.1
3,284,901	+		CCNA_03137	0.31	+0.9
3,284,902	+		CCNA_03137	0.32	-0.8
3,284,910	-		CCNA_03137	0.32	-0.3
3,284,939	+		CCNA_03137	0.35	+1.4
3,285,021	-		CCNA_03137	0.43	-1.0
3,285,049	+		CCNA_03137	0.45	+2.7
3,285,057	-		CCNA_03137	0.46	+1.7
3,285,106	-		CCNA_03137	0.51	-0.7
3,285,147	+		CCNA_03137	0.55	+0.8
3,285,147	+		CCNA_03137	0.55	+1.1
3,285,155	-		CCNA_03137	0.55	+0.2
3,285,220	-		CCNA_03137	0.62	+1.0
3,285,225	+		CCNA_03137	0.62	+0.8
3,285,268	+		CCNA_03137	0.66	+0.3
3,285,273	+		CCNA_03137	0.67	+0.8
3,285,274	+		CCNA_03137	0.67	-0.5
3,285,295	+		CCNA_03137	0.69	+1.1
3,285,328	+		CCNA_03137	0.72	-1.1
3,285,328	+		CCNA_03137	0.72	+1.0
3,285,328	+		CCNA_03137	0.72	-1.2
3,285,328	+		CCNA_03137	0.72	+0.9
3,285,328	+		CCNA_03137	0.72	+0.9
3,285,328	+		CCNA_03137	0.72	+0.8
3,285,336	-		CCNA_03137	0.73	+2.7
3,285,336	-		CCNA_03137	0.73	-0.3
3,285,336	-		CCNA_03137	0.73	-0.2
3,285,336	-		CCNA_03137	0.73	+0.9
3,285,357	-		CCNA_03137	0.75	-0.1
3,285,446	+		CCNA_03137	0.83	+0.7
3,285,446	+		CCNA_03137	0.83	-0.7
3,285,446	+		CCNA_03137	0.83	+0.9
3,285,446	+		CCNA_03137	0.83	-0.6
3,285,449	-				+2.6
3,285,449	-				+0.5
3,285,449	-				+1.9
3,285,451	+				+1.8
3,285,451	+				+3.1
3,285,454	-				+0.7
3,285,454	-				+2.0
3,285,459	-				+2.4
3,285,459	-				+1.1
3,285,459	-				+0.3
3,285,464	-				+3.6
3,285,475	+				-0.4
3,285,481	-				+1.1
3,285,490	+				+1.0
3,285,496	-				+1.4
3,285,511	+				+1.2
3,285,511	+				-1.1
3,285,544	+				+0.9
3,285,554	+				-1.4
3,285,557	-				-1.9