Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03131

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,279,800	+				-0.5
3,279,827	-				-0.1
3,279,868	+				+0.6
3,279,921	+				+0.2
3,279,921	+				+0.3
3,279,929	-				+0.1
3,279,929	-				+1.9
3,279,931	+				-0.1
3,280,003	+				+0.3
3,280,016	-				+1.6
3,280,059	+				+1.4
3,280,072	-				-0.4
3,280,122	+				-2.6
3,280,148	+		CCNA_03131	0.11	-0.2
3,280,149	+		CCNA_03131	0.11	+1.3
3,280,156	-		CCNA_03131	0.12	-0.0
3,280,156	-		CCNA_03131	0.12	+1.1
3,280,169	-		CCNA_03131	0.13	+2.2
3,280,189	+		CCNA_03131	0.16	+1.3
3,280,205	+		CCNA_03131	0.18	-0.5
3,280,221	+		CCNA_03131	0.20	-1.2
3,280,221	+		CCNA_03131	0.20	+0.2
3,280,237	+		CCNA_03131	0.22	+0.2
3,280,240	-		CCNA_03131	0.22	+1.4
3,280,250	-		CCNA_03131	0.23	+1.7
3,280,253	+		CCNA_03131	0.24	+0.5
3,280,260	-		CCNA_03131	0.25	+0.3
3,280,266	-		CCNA_03131	0.25	-0.5
3,280,278	+		CCNA_03131	0.27	-1.3
3,280,290	+		CCNA_03131	0.28	-0.4
3,280,321	-		CCNA_03131	0.32	+2.0
3,280,342	-		CCNA_03131	0.35	+1.6
3,280,357	+		CCNA_03131	0.37	-0.7
3,280,379	+		CCNA_03131	0.39	+0.1
3,280,379	+		CCNA_03131	0.39	+0.9
3,280,401	-		CCNA_03131	0.42	+2.2
3,280,421	-		CCNA_03131	0.45	+0.6
3,280,431	-		CCNA_03131	0.46	-1.3
3,280,473	-		CCNA_03131	0.51	-0.0
3,280,478	-		CCNA_03131	0.52	+1.5
3,280,507	-		CCNA_03131	0.55	+0.4
3,280,507	-		CCNA_03131	0.55	-0.0
3,280,507	-		CCNA_03131	0.55	+1.4
3,280,563	+		CCNA_03131	0.62	+0.9
3,280,563	+		CCNA_03131	0.62	+2.6
3,280,571	-		CCNA_03131	0.63	+0.2
3,280,596	-		CCNA_03131	0.66	+0.4
3,280,618	+		CCNA_03131	0.69	+0.1
3,280,654	+		CCNA_03131	0.74	-0.2
3,280,654	+		CCNA_03131	0.74	+0.9
3,280,662	-		CCNA_03131	0.75	+1.0
3,280,662	-		CCNA_03131	0.75	-0.1
3,280,662	-		CCNA_03131	0.75	+0.5
3,280,685	-		CCNA_03131	0.77	+0.2
3,280,685	-		CCNA_03131	0.77	+1.4
3,280,685	-		CCNA_03131	0.77	-0.1
3,280,770	-		CCNA_03131	0.88	+0.6
3,280,841	-				+0.2
3,280,844	+				-0.6
3,280,852	-				-0.1
3,280,875	-				+1.0
3,280,882	-				+0.4
3,280,913	-				+3.3
3,280,914	-				+1.2
3,280,947	-		CCNA_03132	0.12	+0.5
3,280,950	-		CCNA_03132	0.13	+1.5
3,280,957	+		CCNA_03132	0.15	+1.5
3,280,970	-		CCNA_03132	0.19	+1.9
3,280,994	-		CCNA_03132	0.26	+4.4
3,280,995	-		CCNA_03132	0.27	+3.0
3,281,044	+		CCNA_03132	0.42	-1.5
3,281,061	+		CCNA_03132	0.47	+0.8
3,281,061	+		CCNA_03132	0.47	+1.2
3,281,069	-		CCNA_03132	0.49	+3.0
3,281,069	-		CCNA_03132	0.49	+2.2
3,281,087	+		CCNA_03132	0.55	+0.5
3,281,095	+		CCNA_03132	0.57	+1.4
3,281,103	-		CCNA_03132	0.60	+1.6
3,281,103	-		CCNA_03132	0.60	+1.1
3,281,103	-		CCNA_03132	0.60	+1.9
3,281,122	-		CCNA_03132	0.65	+0.8
3,281,199	+		CCNA_03132	0.89	+0.5
3,281,241	-				-0.6
3,281,248	+				+0.8
3,281,251	-				+0.3
3,281,253	+				-0.4
3,281,286	-		CCNA_03133	0.20	+0.5
3,281,288	+		CCNA_03133	0.20	+1.9
3,281,303	+		CCNA_03133	0.25	-0.1
3,281,303	+		CCNA_03133	0.25	-0.0
3,281,311	-		CCNA_03133	0.28	+0.8
3,281,315	+		CCNA_03133	0.29	-0.4
3,281,323	-		CCNA_03133	0.32	+0.8
3,281,328	-		CCNA_03133	0.34	+1.1
3,281,385	+		CCNA_03133	0.53	+0.2
3,281,385	+		CCNA_03133	0.53	+0.9
3,281,387	+		CCNA_03133	0.54	-1.8
3,281,394	+		CCNA_03133	0.56	-0.4
3,281,427	+		CCNA_03133	0.67	+0.3
3,281,432	+		CCNA_03133	0.69	-1.5
3,281,437	+		CCNA_03133	0.70	+0.6
3,281,462	-		CCNA_03133	0.79	+0.5
3,281,477	-		CCNA_03133	0.84	+1.6
3,281,490	+		CCNA_03133	0.88	+0.8
3,281,490	+		CCNA_03133	0.88	+0.9
3,281,490	+		CCNA_03133	0.88	-1.1
3,281,491	+		CCNA_03133	0.89	+0.1
3,281,498	-				+0.1
3,281,498	-				+2.6
3,281,567	+				+0.3
3,281,567	+				-0.0
3,281,622	+				-0.6
3,281,622	+				-1.4
3,281,622	+				+0.5
3,281,622	+				-0.2
3,281,630	-				+0.3
3,281,630	-				-0.0
3,281,630	-				-1.2
3,281,630	-				-1.3
3,281,630	-				-0.3
3,281,635	-				-0.4
3,281,649	+				-0.1
3,281,727	-				-1.4
3,281,742	+				+0.2
3,281,831	+				+2.7
3,281,842	+				-0.3