Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02754

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,916,977	+		CCNA_02753	0.80	+0.7
2,916,977	+		CCNA_02753	0.80	-0.1
2,916,984	+		CCNA_02753	0.80	+1.9
2,916,984	+		CCNA_02753	0.80	-1.7
2,916,985	-		CCNA_02753	0.80	-0.3
2,917,002	+		CCNA_02753	0.81	+0.3
2,917,010	-		CCNA_02753	0.81	+2.0
2,917,019	-		CCNA_02753	0.82	+0.4
2,917,024	+		CCNA_02753	0.82	+0.4
2,917,024	+		CCNA_02753	0.82	-0.9
2,917,024	+		CCNA_02753	0.82	-0.1
2,917,032	-		CCNA_02753	0.82	+0.2
2,917,032	-		CCNA_02753	0.82	-1.0
2,917,039	-		CCNA_02753	0.82	-1.0
2,917,069	-				+1.8
2,917,082	+		CCNA_02753	0.84	-1.6
2,917,114	+		CCNA_02753	0.85	+0.2
2,917,124	-		CCNA_02753	0.86	-0.3
2,917,135	-		CCNA_02753	0.86	+1.5
2,917,172	+		CCNA_02753	0.88	+1.8
2,917,189	-		CCNA_02753	0.88	+0.2
2,917,200	-		CCNA_02753	0.89	+0.2
2,917,215	-		CCNA_02753	0.90	+0.7
2,917,228	+				-0.4
2,917,320	-				-0.3
2,917,369	-				+0.1
2,917,376	-				+1.0
2,917,393	-				+1.0
2,917,398	-				+0.7
2,917,403	+				+0.8
2,917,411	-				-0.1
2,917,411	-				+1.0
2,917,482	+				+0.8
2,917,483	-				-1.0
2,917,651	+				+2.0
2,917,727	+				-0.5
2,917,784	-				+0.7
2,917,806	-				-0.3
2,917,821	+				+0.6
2,917,821	+				+0.1
2,917,821	+				-0.6
2,917,821	+				+0.2
2,917,821	+				+2.0
2,917,821	+				+1.2
2,917,821	+				+0.6
2,917,821	+				+0.8
2,917,829	-				-0.4
2,917,829	-				-0.3
2,917,829	-				+1.6
2,917,829	-				+2.6
2,917,829	-				+2.6
2,917,829	-				-0.3
2,917,844	-				-2.0
2,917,866	+				-0.7
2,917,895	-				+2.5
2,917,917	+				+0.1
2,917,927	+				+0.3
2,917,927	+				+0.6
2,917,932	+				+0.3
2,917,935	-				+0.8
2,917,972	+				-0.8
2,917,972	+				+0.1
2,917,972	+				+1.4
2,917,980	-				+0.9
2,917,982	-				+1.2
2,918,020	+				+1.6
2,918,124	+		CCNA_02754	0.12	+1.0
2,918,189	+		CCNA_02754	0.17	-1.6
2,918,230	+		CCNA_02754	0.20	-0.3
2,918,237	-		CCNA_02754	0.21	+1.2
2,918,248	-		CCNA_02754	0.22	-0.5
2,918,251	+		CCNA_02754	0.22	+1.6
2,918,253	+		CCNA_02754	0.22	+0.4
2,918,253	+		CCNA_02754	0.22	+1.4
2,918,261	-		CCNA_02754	0.23	-0.7
2,918,329	+		CCNA_02754	0.28	-0.2
2,918,349	-		CCNA_02754	0.30	+0.2
2,918,360	-		CCNA_02754	0.30	+0.5
2,918,365	+		CCNA_02754	0.31	+1.5
2,918,370	-		CCNA_02754	0.31	+3.6
2,918,394	+		CCNA_02754	0.33	-0.3
2,918,394	+		CCNA_02754	0.33	+0.2
2,918,430	-		CCNA_02754	0.36	-0.6
2,918,444	-		CCNA_02754	0.37	+0.2
2,918,463	-		CCNA_02754	0.38	+1.0
2,918,463	-		CCNA_02754	0.38	+0.8
2,918,468	-		CCNA_02754	0.39	+2.7
2,918,491	+		CCNA_02754	0.40	-1.0
2,918,509	+		CCNA_02754	0.42	+1.1
2,918,517	-		CCNA_02754	0.42	-0.0
2,918,545	+		CCNA_02754	0.45	+1.8
2,918,553	-		CCNA_02754	0.45	-1.1
2,918,553	-				+2.4
2,918,555	+		CCNA_02754	0.45	+1.0
2,918,555	+		CCNA_02754	0.45	-0.9
2,918,563	-		CCNA_02754	0.46	+1.8
2,918,609	-		CCNA_02754	0.50	+0.3
2,918,614	+		CCNA_02754	0.50	+0.8
2,918,619	+		CCNA_02754	0.50	-1.0
2,918,630	+		CCNA_02754	0.51	+0.5
2,918,630	+		CCNA_02754	0.51	+1.3
2,918,643	+		CCNA_02754	0.52	-1.4
2,918,645	+		CCNA_02754	0.52	+2.1
2,918,653	-		CCNA_02754	0.53	-1.7
2,918,662	+				+3.4
2,918,662	+		CCNA_02754	0.54	-0.7
2,918,662	+		CCNA_02754	0.54	-1.7
2,918,670	-		CCNA_02754	0.54	+0.9
2,918,670	-		CCNA_02754	0.54	+0.8
2,918,670	-		CCNA_02754	0.54	+1.3
2,918,670	-		CCNA_02754	0.54	+1.7
2,918,670	-		CCNA_02754	0.54	-0.2
2,918,675	+		CCNA_02754	0.55	+0.3
2,918,683	-		CCNA_02754	0.55	+0.3
2,918,683	-		CCNA_02754	0.55	+1.0
2,918,699	-		CCNA_02754	0.57	+0.0
2,918,808	+		CCNA_02754	0.65	-0.7
2,918,815	+		CCNA_02754	0.65	+1.9
2,918,820	+		CCNA_02754	0.66	+2.0
2,918,833	+		CCNA_02754	0.67	+1.6
2,918,833	-		CCNA_02754	0.67	+0.4
2,918,833	-		CCNA_02754	0.67	+1.6
2,918,872	-		CCNA_02754	0.70	+2.5
2,918,890	+		CCNA_02754	0.71	-0.4
2,918,912	-		CCNA_02754	0.73	-0.9
2,918,912	-		CCNA_02754	0.73	+0.3
2,918,925	-		CCNA_02754	0.74	+0.8
2,918,925	-		CCNA_02754	0.74	+1.6
2,918,925	-		CCNA_02754	0.74	+0.8
2,918,936	+		CCNA_02754	0.75	-1.4
2,918,942	-		CCNA_02754	0.75	-0.2
2,918,944	-		CCNA_02754	0.75	-0.2
2,918,944	-		CCNA_02754	0.75	-0.8
2,918,944	-		CCNA_02754	0.75	-0.0
2,918,944	-		CCNA_02754	0.75	-0.3
2,918,944	-		CCNA_02754	0.75	-0.5
2,918,953	-		CCNA_02754	0.76	+1.9
2,918,959	+		CCNA_02754	0.77	+1.2
2,918,979	+		CCNA_02754	0.78	-0.8
2,918,981	-		CCNA_02754	0.78	+0.5
2,918,981	-		CCNA_02754	0.78	+1.3
2,918,986	-		CCNA_02754	0.79	-0.0
2,919,016	+		CCNA_02754	0.81	-0.6
2,919,016	+		CCNA_02754	0.81	+3.2
2,919,019	-		CCNA_02754	0.81	+0.6
2,919,019	-		CCNA_02754	0.81	+1.2
2,919,019	-		CCNA_02754	0.81	+0.7
2,919,026	+		CCNA_02754	0.82	+0.8
2,919,045	+		CCNA_02754	0.83	-0.2
2,919,045	+		CCNA_02754	0.83	-0.4
2,919,063	-		CCNA_02754	0.85	+2.5
2,919,097	+		CCNA_02754	0.87	+1.0
2,919,111	-		CCNA_02754	0.88	+1.6
2,919,123	-		CCNA_02754	0.89	+0.6
2,919,163	+				+0.7
2,919,163	+				+1.2
2,919,168	+				+2.5
2,919,171	-				+1.1
2,919,171	-				+1.4
2,919,192	+				+1.0
2,919,200	-				-1.0
2,919,205	-				+1.1
2,919,206	-				+2.8
2,919,244	+				+2.1
2,919,274	-				+0.7
2,919,282	-				+0.4
2,919,282	-				+2.6
2,919,308	+				+1.6
2,919,328	+				+0.2
2,919,328	+				-0.8
2,919,345	+				+0.5
2,919,350	+				-0.9
2,919,353	-				-0.6
2,919,404	+				-0.0
2,919,409	+				+0.2
2,919,409	+				+2.3
2,919,409	+				+1.4
2,919,422	-				+0.2
2,919,720	+		CCNA_02755	0.12	-1.1
2,919,745	+		CCNA_02755	0.19	-1.2
2,919,748	-		CCNA_02755	0.19	+0.8
2,919,753	-		CCNA_02755	0.21	+1.4
2,919,774	+		CCNA_02755	0.26	-0.3
2,919,774	+		CCNA_02755	0.26	-0.5
2,919,774	+		CCNA_02755	0.26	-1.6
2,919,778	+		CCNA_02755	0.27	-0.0
2,919,778	+		CCNA_02755	0.27	+0.5
2,919,779	+		CCNA_02755	0.27	+0.7
2,919,780	+		CCNA_02755	0.27	-0.1
2,919,786	-		CCNA_02755	0.29	-0.2
2,919,787	-		CCNA_02755	0.29	+0.8
2,919,797	+		CCNA_02755	0.32	+0.7
2,919,797	+		CCNA_02755	0.32	-0.9
2,919,805	-		CCNA_02755	0.34	-1.6
2,919,850	-		CCNA_02755	0.45	+1.4
2,919,850	-		CCNA_02755	0.45	+1.8
2,919,854	+		CCNA_02755	0.46	+0.2
2,919,954	+		CCNA_02755	0.71	-0.9
2,919,954	+		CCNA_02755	0.71	-2.4
2,919,974	+		CCNA_02755	0.76	-0.2
2,919,975	-		CCNA_02755	0.76	+0.8
2,919,975	-		CCNA_02755	0.76	-1.3
2,919,980	+		CCNA_02755	0.77	+3.7
2,919,980	+		CCNA_02755	0.77	-0.2
2,919,988	-		CCNA_02755	0.79	+0.5
2,920,037	+				+0.8
2,920,045	-				-1.9
2,920,076	+				-0.9
2,920,086	+				-0.3
2,920,092	+				+0.0
2,920,118	+				-0.0
2,920,125	+				+1.4
2,920,125	+				+1.0
2,920,126	-				-0.5
2,920,133	-				+0.1
2,920,133	-				+0.7
2,920,133	-				+0.2
2,920,147	-				+0.2
2,920,151	+		CCNA_02756	0.10	+1.0
2,920,151	+		CCNA_02756	0.10	+0.8
2,920,157	-		CCNA_02756	0.11	-0.7
2,920,157	-		CCNA_02756	0.11	+1.4
2,920,157	-		CCNA_02756	0.11	+0.6
2,920,159	-		CCNA_02756	0.11	+0.8
2,920,159	-		CCNA_02756	0.11	-0.7
2,920,159	-		CCNA_02756	0.11	+1.0
2,920,255	+				+2.8
2,920,259	-		CCNA_02756	0.25	+0.5
2,920,259	-		CCNA_02756	0.25	+1.3
2,920,263	+		CCNA_02756	0.25	-1.7
2,920,263	+		CCNA_02756	0.25	+0.9