Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02609

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,755,121	+				+3.6
2,755,128	+				+3.6
2,755,128	+				+3.5
2,755,136	+				+3.4
2,755,136	+				+3.5
2,755,214	+				+2.4
2,755,214	+				-0.6
2,755,245	+				+3.1
2,755,250	+				-2.0
2,755,253	-				-0.8
2,755,258	-				+0.2
2,755,287	+				+0.4
2,755,293	-				-1.0
2,755,308	+				-1.7
2,755,402	+		CCNA_02608	0.20	+1.3
2,755,402	+		CCNA_02608	0.20	-0.8
2,755,402	+		CCNA_02608	0.20	+0.2
2,755,438	+		CCNA_02608	0.26	+1.0
2,755,438	+		CCNA_02608	0.26	+1.1
2,755,446	-		CCNA_02608	0.27	+0.3
2,755,474	+		CCNA_02608	0.32	+0.5
2,755,573	+		CCNA_02608	0.49	-0.7
2,755,575	-		CCNA_02608	0.49	-0.0
2,755,621	-		CCNA_02608	0.57	-0.3
2,755,626	+		CCNA_02608	0.58	+2.0
2,755,646	-		CCNA_02608	0.62	-1.7
2,755,679	+		CCNA_02608	0.67	+0.5
2,755,679	+		CCNA_02608	0.67	+0.1
2,755,693	-		CCNA_02608	0.70	-0.9
2,755,694	+		CCNA_02608	0.70	+1.0
2,755,780	+		CCNA_02608	0.85	+2.3
2,755,787	+		CCNA_02608	0.86	+1.7
2,755,787	+		CCNA_02608	0.86	+0.3
2,755,821	-				+1.6
2,755,885	+				+2.4
2,755,949	-				+0.5
2,755,949	-				+0.7
2,755,986	-		CCNA_02609	0.12	-0.2
2,755,992	+		CCNA_02609	0.12	+0.2
2,756,012	+		CCNA_02609	0.14	+2.4
2,756,030	-		CCNA_02609	0.16	+2.6
2,756,043	+		CCNA_02609	0.18	+0.4
2,756,048	+		CCNA_02609	0.18	+1.2
2,756,059	+		CCNA_02609	0.19	+0.4
2,756,083	-		CCNA_02609	0.22	+0.2
2,756,144	+		CCNA_02609	0.28	+1.0
2,756,145	+		CCNA_02609	0.28	+0.9
2,756,145	+		CCNA_02609	0.28	-0.4
2,756,155	+		CCNA_02609	0.29	+0.7
2,756,163	-		CCNA_02609	0.30	-0.5
2,756,163	-		CCNA_02609	0.30	+2.1
2,756,163	-		CCNA_02609	0.30	+0.6
2,756,163	-		CCNA_02609	0.30	+0.4
2,756,165	+		CCNA_02609	0.31	-0.1
2,756,173	-		CCNA_02609	0.31	-0.0
2,756,200	-		CCNA_02609	0.34	-0.3
2,756,313	+		CCNA_02609	0.46	+0.2
2,756,321	-		CCNA_02609	0.47	+0.4
2,756,363	-		CCNA_02609	0.52	-1.0
2,756,429	+		CCNA_02609	0.59	+1.2
2,756,437	-		CCNA_02609	0.60	+1.1
2,756,437	-		CCNA_02609	0.60	+1.6
2,756,474	-		CCNA_02609	0.63	+0.3
2,756,513	-		CCNA_02609	0.68	+1.8
2,756,516	+		CCNA_02609	0.68	+1.7
2,756,516	+		CCNA_02609	0.68	+0.4
2,756,554	+		CCNA_02609	0.72	-0.7
2,756,567	-		CCNA_02609	0.73	+0.9
2,756,573	+		CCNA_02609	0.74	+0.6
2,756,579	+		CCNA_02609	0.75	+0.9
2,756,580	+		CCNA_02609	0.75	+1.7
2,756,587	-		CCNA_02609	0.76	-0.9
2,756,590	+		CCNA_02609	0.76	+0.7
2,756,595	+		CCNA_02609	0.76	-1.1
2,756,598	-		CCNA_02609	0.77	-1.5
2,756,608	-		CCNA_02609	0.78	-0.8
2,756,617	+		CCNA_02609	0.79	+1.3
2,756,694	+		CCNA_02609	0.87	+1.1
2,756,694	+		CCNA_02609	0.87	+4.0
2,756,694	+		CCNA_02609	0.87	-1.1
2,756,702	-		CCNA_02609	0.88	-0.7
2,756,705	+		CCNA_02609	0.88	+0.6
2,756,713	+		CCNA_02609	0.89	-1.5
2,756,713	-		CCNA_02609	0.89	+0.8
2,756,721	-		CCNA_02609	0.90	-1.1
2,756,723	-				+0.8
2,756,772	-				-0.7
2,756,802	+				+0.1
2,756,826	-				+1.6
2,756,920	-		CCNA_02610	0.19	+2.7
2,756,964	+		CCNA_02610	0.30	-0.5
2,756,964	+		CCNA_02610	0.30	+0.5
2,756,993	-		CCNA_02610	0.38	-1.1
2,756,994	-		CCNA_02610	0.38	-0.5
2,757,001	-		CCNA_02610	0.40	+0.2
2,757,001	-		CCNA_02610	0.40	-1.0
2,757,014	-		CCNA_02610	0.44	+1.7
2,757,016	-		CCNA_02610	0.44	-0.2
2,757,032	-		CCNA_02610	0.48	-0.3
2,757,126	-		CCNA_02610	0.73	-1.7
2,757,126	-		CCNA_02610	0.73	+1.0
2,757,163	-		CCNA_02610	0.83	+0.2
2,757,170	-		CCNA_02610	0.85	-0.8
2,757,195	+				-1.3
2,757,222	-				+0.3
2,757,233	-				+1.1
2,757,235	-				-1.3
2,757,249	+				+1.1
2,757,263	+				-1.2
2,757,265	+				-0.7
2,757,269	+				-1.5
2,757,269	+				-1.7
2,757,269	+				-0.2
2,757,273	-				+3.1
2,757,273	-				-0.3
2,757,276	+				-0.8
2,757,298	-				-0.1
2,757,354	-				-1.4
2,757,370	+		CCNA_02611	0.12	-0.9
2,757,378	-		CCNA_02611	0.13	-1.0
2,757,457	-		CCNA_02611	0.21	+0.2
2,757,487	+		CCNA_02611	0.25	-1.4
2,757,495	-		CCNA_02611	0.26	+0.7
2,757,495	-		CCNA_02611	0.26	+0.3
2,757,495	-		CCNA_02611	0.26	+2.1
2,757,495	-		CCNA_02611	0.26	+0.8
2,757,495	-		CCNA_02611	0.26	+1.5
2,757,495	-		CCNA_02611	0.26	-0.9
2,757,495	-		CCNA_02611	0.26	+0.5
2,757,509	-		CCNA_02611	0.27	+0.9
2,757,543	-		CCNA_02611	0.31	+0.0
2,757,548	-		CCNA_02611	0.32	-1.6
2,757,618	-		CCNA_02611	0.40	-2.2
2,757,746	+		CCNA_02611	0.54	+0.8
2,757,755	-		CCNA_02611	0.55	+1.0
2,757,759	+		CCNA_02611	0.55	+2.1
2,757,772	-		CCNA_02611	0.57	-0.4
2,757,773	-		CCNA_02611	0.57	-0.6
2,757,800	-		CCNA_02611	0.60	+0.4
2,757,811	+		CCNA_02611	0.61	-0.8