Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02363

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,501,466	-		CCNA_02361	0.86	+0.1
2,501,535	+				-0.3
2,501,555	+				+0.6
2,501,555	+				+0.2
2,501,626	+				-0.3
2,501,636	+				+1.1
2,501,644	-				+0.8
2,501,644	-				+2.2
2,501,644	-				+1.7
2,501,644	-				+3.6
2,501,696	-				-0.0
2,501,701	-				+1.5
2,501,701	-				+1.7
2,501,778	+		CCNA_02362	0.11	-0.6
2,501,780	+		CCNA_02362	0.12	+1.0
2,501,920	+		CCNA_02362	0.40	+0.9
2,501,923	-		CCNA_02362	0.41	-0.2
2,501,923	-		CCNA_02362	0.41	+0.5
2,501,944	+		CCNA_02362	0.45	+2.4
2,501,952	+		CCNA_02362	0.46	+1.4
2,501,954	-		CCNA_02362	0.47	+1.0
2,501,984	+		CCNA_02362	0.53	-0.2
2,501,988	-		CCNA_02362	0.54	+0.1
2,501,988	-		CCNA_02362	0.54	+0.6
2,501,988	-		CCNA_02362	0.54	+0.2
2,501,994	+		CCNA_02362	0.55	-0.1
2,501,994	+		CCNA_02362	0.55	+1.6
2,501,994	+		CCNA_02362	0.55	+0.9
2,502,029	-		CCNA_02362	0.62	+1.6
2,502,039	+		CCNA_02362	0.64	+0.4
2,502,039	+		CCNA_02362	0.64	-0.5
2,502,047	-		CCNA_02362	0.66	+0.8
2,502,062	-		CCNA_02362	0.69	+1.2
2,502,097	+		CCNA_02362	0.76	+0.2
2,502,118	-		CCNA_02362	0.80	-1.7
2,502,127	+		CCNA_02362	0.82	-1.7
2,502,140	-		CCNA_02362	0.84	+2.1
2,502,197	-				-0.0
2,502,205	+				+1.5
2,502,228	+				-1.1
2,502,228	+				+1.6
2,502,228	+				-0.6
2,502,245	+				-0.6
2,502,245	+				+0.6
2,502,267	+				-0.0
2,502,268	+				+0.7
2,502,300	+				+2.1
2,502,300	+				+0.2
2,502,302	-				-0.0
2,502,310	-				-1.3
2,502,369	+				+0.9
2,502,407	+				+0.7
2,502,415	-				-0.8
2,502,415	-				-1.7
2,502,444	+		CCNA_02363	0.10	-0.3
2,502,469	+		CCNA_02363	0.18	+0.1
2,502,512	+		CCNA_02363	0.31	+1.7
2,502,537	+		CCNA_02363	0.38	-0.7
2,502,548	+		CCNA_02363	0.42	+2.4
2,502,548	+		CCNA_02363	0.42	+0.8
2,502,548	+		CCNA_02363	0.42	+1.9
2,502,548	+		CCNA_02363	0.42	+2.4
2,502,548	+		CCNA_02363	0.42	+0.0
2,502,548	+		CCNA_02363	0.42	+1.2
2,502,548	+		CCNA_02363	0.42	+0.6
2,502,556	-		CCNA_02363	0.44	+0.2
2,502,556	-		CCNA_02363	0.44	-0.1
2,502,579	+		CCNA_02363	0.51	+0.5
2,502,604	-		CCNA_02363	0.59	+1.5
2,502,605	+		CCNA_02363	0.59	+1.5
2,502,613	-		CCNA_02363	0.62	-1.2
2,502,613	-		CCNA_02363	0.62	+0.4
2,502,613	-		CCNA_02363	0.62	+0.7
2,502,614	-		CCNA_02363	0.62	-0.9
2,502,670	+		CCNA_02363	0.79	+1.8
2,502,671	+		CCNA_02363	0.79	+2.3
2,502,691	+		CCNA_02363	0.85	+0.7
2,502,734	+				-0.3
2,502,734	+				+0.7
2,502,734	+				+1.5
2,502,736	-				-0.6
2,502,742	-				+0.3
2,502,742	-				+0.3
2,502,742	-				-1.5
2,502,753	+				+0.9
2,502,800	+				+0.1
2,502,841	-				-0.5
2,502,902	-				+0.9
2,502,913	-				-0.2
2,502,926	+				-1.2
2,502,984	-		CCNA_02364	0.11	-1.4
2,503,000	-		CCNA_02364	0.11	-0.3
2,503,014	-		CCNA_02364	0.12	+0.9
2,503,024	-		CCNA_02364	0.12	-1.2
2,503,042	+		CCNA_02364	0.13	-0.6
2,503,109	+		CCNA_02364	0.16	-0.2
2,503,163	+		CCNA_02364	0.18	+5.2
2,503,187	+				+1.7
2,503,192	+		CCNA_02364	0.19	-0.7
2,503,192	+		CCNA_02364	0.19	-0.0
2,503,200	-		CCNA_02364	0.20	-0.3
2,503,209	+		CCNA_02364	0.20	+2.9
2,503,233	+		CCNA_02364	0.21	+1.5
2,503,241	-		CCNA_02364	0.22	-0.7
2,503,241	-		CCNA_02364	0.22	-1.0
2,503,248	+		CCNA_02364	0.22	+1.3
2,503,248	+		CCNA_02364	0.22	-1.5
2,503,287	-		CCNA_02364	0.23	-1.0
2,503,383	-		CCNA_02364	0.28	-1.6
2,503,387	+		CCNA_02364	0.28	-0.5
2,503,426	-		CCNA_02364	0.29	-0.3
2,503,435	+		CCNA_02364	0.30	-0.5
2,503,478	-		CCNA_02364	0.32	+2.6
2,503,491	+		CCNA_02364	0.32	-1.5
2,503,491	+		CCNA_02364	0.32	-0.0
2,503,499	-		CCNA_02364	0.33	+0.4
2,503,499	-		CCNA_02364	0.33	+0.5
2,503,514	+		CCNA_02364	0.33	-1.7
2,503,522	-		CCNA_02364	0.34	+0.8
2,503,532	-		CCNA_02364	0.34	-0.5
2,503,596	-		CCNA_02364	0.37	+1.1
2,503,637	+		CCNA_02364	0.38	+0.6
2,503,671	-		CCNA_02364	0.40	+1.0
2,503,739	+		CCNA_02364	0.43	+0.1