Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02353

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,491,809	+		CCNA_02352	0.55	+1.4
2,491,811	+		CCNA_02352	0.55	+0.7
2,491,811	+		CCNA_02352	0.55	-0.7
2,491,811	+				+2.0
2,491,811	+		CCNA_02352	0.55	-2.3
2,491,819	-		CCNA_02352	0.55	+1.2
2,491,819	-		CCNA_02352	0.55	-0.1
2,491,819	-		CCNA_02352	0.55	-0.5
2,491,838	+		CCNA_02352	0.56	+0.7
2,491,868	+		CCNA_02352	0.58	-1.2
2,491,881	-		CCNA_02352	0.58	+0.1
2,491,924	+		CCNA_02352	0.60	-0.7
2,492,008	-		CCNA_02352	0.64	+1.1
2,492,064	+		CCNA_02352	0.67	-1.8
2,492,064	+		CCNA_02352	0.67	+0.3
2,492,064	+		CCNA_02352	0.67	+0.7
2,492,064	+		CCNA_02352	0.67	-1.3
2,492,064	+		CCNA_02352	0.67	+1.6
2,492,064	+		CCNA_02352	0.67	-0.3
2,492,064	+		CCNA_02352	0.67	-0.7
2,492,072	-		CCNA_02352	0.67	+1.1
2,492,072	-		CCNA_02352	0.67	+2.4
2,492,072	-		CCNA_02352	0.67	+1.5
2,492,072	-		CCNA_02352	0.67	+2.4
2,492,072	-		CCNA_02352	0.67	+1.3
2,492,078	-		CCNA_02352	0.67	+2.1
2,492,082	-		CCNA_02352	0.67	+1.8
2,492,094	+		CCNA_02352	0.68	-1.1
2,492,103	+		CCNA_02352	0.68	-0.9
2,492,108	+		CCNA_02352	0.69	-1.1
2,492,150	-		CCNA_02352	0.70	+2.0
2,492,163	-		CCNA_02352	0.71	+0.5
2,492,206	-		CCNA_02352	0.73	+0.8
2,492,206	-		CCNA_02352	0.73	+1.7
2,492,215	-		CCNA_02352	0.73	+1.0
2,492,235	+		CCNA_02352	0.74	-0.1
2,492,235	+		CCNA_02352	0.74	-0.1
2,492,235	+		CCNA_02352	0.74	+2.4
2,492,243	-		CCNA_02352	0.75	+2.0
2,492,243	-		CCNA_02352	0.75	+1.2
2,492,243	-		CCNA_02352	0.75	+1.5
2,492,292	+		CCNA_02352	0.77	-1.4
2,492,300	-		CCNA_02352	0.77	-1.1
2,492,358	+		CCNA_02352	0.80	+0.3
2,492,358	+		CCNA_02352	0.80	-0.2
2,492,361	-		CCNA_02352	0.80	+0.7
2,492,366	-		CCNA_02352	0.80	+1.2
2,492,366	-		CCNA_02352	0.80	-0.2
2,492,367	-		CCNA_02352	0.80	-0.2
2,492,389	-		CCNA_02352	0.81	+1.9
2,492,403	+		CCNA_02352	0.82	-0.4
2,492,413	-		CCNA_02352	0.83	+1.3
2,492,413	-		CCNA_02352	0.83	+0.6
2,492,423	-		CCNA_02352	0.83	+0.6
2,492,438	+		CCNA_02352	0.84	-0.8
2,492,446	-		CCNA_02352	0.84	+0.3
2,492,460	-		CCNA_02352	0.85	-0.4
2,492,485	+		CCNA_02352	0.86	-1.3
2,492,491	-		CCNA_02352	0.86	-0.3
2,492,533	+		CCNA_02352	0.88	-0.3
2,492,578	+				-0.9
2,492,583	+				+1.0
2,492,591	-				+3.3
2,492,591	-				-0.3
2,492,612	-				+1.0
2,492,653	+				-0.2
2,492,658	-				+0.8
2,492,664	+				+1.6
2,492,666	-				+2.7
2,492,668	+				+3.4
2,492,672	-				-0.0
2,492,681	+				-0.8
2,492,688	+				+0.4
2,492,709	-				+1.0
2,492,714	-				-0.0
2,492,756	+				-1.1
2,492,778	+				+0.9
2,492,784	-				+1.4
2,492,800	-				+0.8
2,492,803	+				+0.7
2,492,806	-				+2.6
2,492,818	+				-0.4
2,492,821	-				+0.6
2,492,842	+		CCNA_02353	0.10	-1.4
2,492,842	+		CCNA_02353	0.10	-0.5
2,492,842	+		CCNA_02353	0.10	-0.3
2,492,842	+		CCNA_02353	0.10	+0.6
2,492,850	-		CCNA_02353	0.12	+1.9
2,492,850	-		CCNA_02353	0.12	-0.6
2,492,855	-		CCNA_02353	0.13	+1.3
2,492,904	+		CCNA_02353	0.24	+0.7
2,492,904	+		CCNA_02353	0.24	-1.1
2,492,959	-		CCNA_02353	0.35	+0.9
2,492,959	-		CCNA_02353	0.35	-0.8
2,492,965	+		CCNA_02353	0.37	-0.7
2,492,965	+		CCNA_02353	0.37	+0.4
2,492,965	+		CCNA_02353	0.37	-1.8
2,492,973	-		CCNA_02353	0.38	+0.4
2,492,973	-		CCNA_02353	0.38	+1.3
2,492,973	-		CCNA_02353	0.38	+0.3
2,492,996	+		CCNA_02353	0.43	+0.0
2,492,997	+		CCNA_02353	0.44	+0.3
2,493,003	+		CCNA_02353	0.45	+0.2
2,493,004	-		CCNA_02353	0.45	+0.3
2,493,036	+		CCNA_02353	0.52	-0.1
2,493,040	-		CCNA_02353	0.53	+0.9
2,493,070	+		CCNA_02353	0.59	+0.7
2,493,099	-		CCNA_02353	0.66	+0.7
2,493,111	-		CCNA_02353	0.68	+3.3
2,493,111	-		CCNA_02353	0.68	+1.9
2,493,116	+		CCNA_02353	0.69	-0.4
2,493,153	-		CCNA_02353	0.77	+0.3
2,493,153	-		CCNA_02353	0.77	+0.8
2,493,185	+		CCNA_02353	0.84	+0.3
2,493,185	+		CCNA_02353	0.84	+0.2
2,493,193	-		CCNA_02353	0.86	+0.1
2,493,193	-		CCNA_02353	0.86	-1.1
2,493,193	-		CCNA_02353	0.86	+0.8
2,493,253	-				+1.0
2,493,260	+				+0.4
2,493,268	-				+0.8
2,493,276	-				+1.0
2,493,276	-				+0.5
2,493,291	-				-0.8
2,493,316	-				+0.6
2,493,368	+				+1.6
2,493,435	+				+0.5
2,493,438	+				+0.9
2,493,442	-				-0.3
2,493,443	-				+1.2
2,493,500	+				+0.1
2,493,502	-				+0.1
2,493,561	+				+0.7
2,493,569	+				+3.8
2,493,569	-				-0.3
2,493,607	-				+1.2
2,493,658	-				+1.7
2,493,689	-				-0.6
2,493,727	+		CCNA_02354	0.13	-1.0
2,493,730	-		CCNA_02354	0.14	-0.7
2,493,735	-		CCNA_02354	0.15	-0.6
2,493,769	-		CCNA_02354	0.21	-1.0
2,493,787	+		CCNA_02354	0.24	+0.8
2,493,787	+		CCNA_02354	0.24	+1.0
2,493,795	-		CCNA_02354	0.25	-2.2
2,493,795	-		CCNA_02354	0.25	+0.2
2,493,848	+		CCNA_02354	0.35	+0.5
2,493,855	+		CCNA_02354	0.36	+1.7
2,493,869	+		CCNA_02354	0.38	-0.0
2,493,869	+		CCNA_02354	0.38	+1.1
2,493,877	-		CCNA_02354	0.40	-0.6
2,493,877	-		CCNA_02354	0.40	+0.2
2,493,949	+		CCNA_02354	0.52	-2.0
2,493,977	+		CCNA_02354	0.57	-0.9
2,493,999	+		CCNA_02354	0.61	+0.1
2,494,000	+		CCNA_02354	0.62	-0.9
2,494,020	+		CCNA_02354	0.65	-0.6
2,494,035	+		CCNA_02354	0.68	-0.3
2,494,106	+		CCNA_02354	0.80	+1.2
2,494,109	-		CCNA_02354	0.81	+0.0
2,494,109	-		CCNA_02354	0.81	+1.4
2,494,109	-		CCNA_02354	0.81	+1.4
2,494,114	-		CCNA_02354	0.82	-0.5
2,494,139	+		CCNA_02354	0.86	+2.7
2,494,162	+				-0.6
2,494,228	+				+2.3
2,494,228	+				+1.5
2,494,228	+				+2.3
2,494,255	-				+0.2