Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02254

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,403,534	-		CCNA_02253	0.59	-0.9
2,403,534	-		CCNA_02253	0.59	-0.7
2,403,577	+		CCNA_02253	0.61	-0.2
2,403,577	+		CCNA_02253	0.61	-1.2
2,403,642	-		CCNA_02253	0.65	-0.2
2,403,668	+		CCNA_02253	0.66	-0.4
2,403,676	-		CCNA_02253	0.67	-0.8
2,403,681	-		CCNA_02253	0.67	-1.3
2,403,731	+		CCNA_02253	0.70	-2.2
2,403,757	+		CCNA_02253	0.71	-0.2
2,403,764	+		CCNA_02253	0.72	+0.0
2,403,765	-		CCNA_02253	0.72	-1.0
2,403,817	+		CCNA_02253	0.75	-0.9
2,403,817	+		CCNA_02253	0.75	+0.1
2,403,818	+		CCNA_02253	0.75	-0.6
2,403,826	-		CCNA_02253	0.75	-0.8
2,403,891	-		CCNA_02253	0.79	-0.8
2,403,924	+		CCNA_02253	0.81	+0.2
2,403,956	+		CCNA_02253	0.82	-0.3
2,403,969	-		CCNA_02253	0.83	-0.9
2,403,988	+		CCNA_02253	0.84	-1.4
2,404,013	+		CCNA_02253	0.86	-1.4
2,404,041	-		CCNA_02253	0.87	-1.0
2,404,079	+		CCNA_02253	0.89	-1.6
2,404,079	+		CCNA_02253	0.89	-0.1
2,404,097	-				+0.6
2,404,173	+				+0.6
2,404,182	+				+2.6
2,404,187	-				-0.2
2,404,197	+				-0.7
2,404,243	+				+2.1
2,404,255	-				-2.0
2,404,270	+				+0.2
2,404,317	-				-0.1
2,404,322	+				+1.3
2,404,322	+				+1.8
2,404,343	+		CCNA_03965	0.23	-0.3
2,404,343	+		CCNA_03965	0.23	+1.5
2,404,518	-				+1.8
2,404,518	-				+2.3
2,404,518	-				+1.7
2,404,590	-				+1.9
2,404,629	+				+0.9
2,404,658	-		CCNA_02254	0.12	+1.9
2,404,659	-		CCNA_02254	0.12	+2.1
2,404,700	-		CCNA_02254	0.16	+1.6
2,404,736	-		CCNA_02254	0.19	+2.1
2,404,737	-		CCNA_02254	0.19	+2.1
2,404,749	-		CCNA_02254	0.20	+2.0
2,404,749	-		CCNA_02254	0.20	+2.4
2,404,815	-		CCNA_02254	0.26	+2.3
2,404,896	-				+1.6
2,405,096	-		CCNA_02254	0.50	+2.3
2,405,154	-		CCNA_02254	0.55	+1.1
2,405,159	-				+1.6
2,405,225	+		CCNA_02254	0.61	+1.6
2,405,263	-		CCNA_02254	0.64	-1.1
2,405,282	+		CCNA_02254	0.66	+0.7
2,405,378	+		CCNA_02254	0.74	+1.1
2,405,386	-		CCNA_02254	0.75	-0.4
2,405,397	+		CCNA_02254	0.76	-1.1
2,405,450	+		CCNA_02254	0.80	-0.7
2,405,460	+		CCNA_02254	0.81	+0.9
2,405,468	-		CCNA_02254	0.82	+0.9
2,405,541	+		CCNA_02254	0.88	-0.4
2,405,632	-				+0.2
2,405,660	-				+0.2
2,405,715	-				-0.8
2,405,725	-				+1.4
2,405,726	-				-0.2
2,405,740	+				+2.6
2,405,740	+				+1.2
2,405,748	-				-1.0
2,405,750	+				+1.9
2,405,877	+				-1.6
2,405,885	-				+1.1
2,405,885	-				+1.3
2,405,897	+				-0.3
2,405,897	+				-1.1
2,405,905	-				+1.2
2,405,905	-				+1.7
2,405,929	-				+0.9
2,405,966	-				-0.3
2,405,983	+				+0.4
2,406,029	-		CCNA_02255	0.11	-0.2
2,406,030	-		CCNA_02255	0.12	+0.3
2,406,037	+		CCNA_02255	0.12	-1.6
2,406,045	-		CCNA_02255	0.13	+0.6
2,406,050	-		CCNA_02255	0.13	+1.1
2,406,060	-		CCNA_02255	0.14	+1.3
2,406,070	-		CCNA_02255	0.15	+0.2
2,406,109	+		CCNA_02255	0.18	+0.8
2,406,112	-		CCNA_02255	0.18	+0.5
2,406,134	+		CCNA_02255	0.20	-0.6
2,406,180	-		CCNA_02255	0.23	+1.2
2,406,207	+		CCNA_02255	0.25	-0.5
2,406,207	+		CCNA_02255	0.25	-1.1
2,406,210	-		CCNA_02255	0.25	+0.3
2,406,237	+		CCNA_02255	0.28	-0.3
2,406,270	-		CCNA_02255	0.30	+0.7
2,406,272	+		CCNA_02255	0.30	-0.1
2,406,272	+		CCNA_02255	0.30	+0.7
2,406,272	+		CCNA_02255	0.30	+0.7
2,406,280	-		CCNA_02255	0.31	-0.2
2,406,292	+		CCNA_02255	0.32	-0.3
2,406,310	-		CCNA_02255	0.33	+0.7
2,406,358	+		CCNA_02255	0.37	-0.6
2,406,358	+		CCNA_02255	0.37	-0.4
2,406,358	+		CCNA_02255	0.37	+0.7
2,406,358	+		CCNA_02255	0.37	-0.4
2,406,366	-		CCNA_02255	0.38	+1.3
2,406,398	+		CCNA_02255	0.40	+0.1
2,406,422	+		CCNA_02255	0.42	+0.7
2,406,422	+		CCNA_02255	0.42	+1.7
2,406,422	+		CCNA_02255	0.42	-1.3
2,406,430	-				+2.9
2,406,430	-		CCNA_02255	0.42	-0.8
2,406,430	-		CCNA_02255	0.42	+0.5
2,406,431	-		CCNA_02255	0.43	-0.4
2,406,501	-		CCNA_02255	0.48	+2.5
2,406,501	-		CCNA_02255	0.48	+0.2
2,406,562	+		CCNA_02255	0.53	-1.4
2,406,593	+		CCNA_02255	0.55	-1.8
2,406,602	-		CCNA_02255	0.56	-1.9
2,406,677	+		CCNA_02255	0.61	-0.6