Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02238

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,387,332	+		CCNA_02237	0.61	+0.3
2,387,332	+		CCNA_02237	0.61	-0.0
2,387,334	+		CCNA_02237	0.61	+0.1
2,387,344	+		CCNA_02237	0.62	+1.1
2,387,352	-		CCNA_02237	0.62	-2.1
2,387,422	-		CCNA_02237	0.65	-0.6
2,387,427	-		CCNA_02237	0.66	-0.1
2,387,431	+		CCNA_02237	0.66	+0.3
2,387,455	-		CCNA_02237	0.67	+0.8
2,387,457	+		CCNA_02237	0.67	+0.4
2,387,462	+		CCNA_02237	0.67	-0.4
2,387,465	-		CCNA_02237	0.67	-0.8
2,387,472	+		CCNA_02237	0.68	-0.4
2,387,487	-		CCNA_02237	0.68	-0.9
2,387,493	+		CCNA_02237	0.69	-0.6
2,387,539	-		CCNA_02237	0.71	+0.4
2,387,571	+		CCNA_02237	0.72	+0.6
2,387,579	-		CCNA_02237	0.72	-0.5
2,387,725	+		CCNA_02237	0.79	+1.9
2,387,735	+		CCNA_02237	0.79	+1.5
2,387,740	+		CCNA_02237	0.80	+0.9
2,387,743	-		CCNA_02237	0.80	+0.9
2,387,748	-		CCNA_02237	0.80	-2.4
2,387,781	-		CCNA_02237	0.82	+1.1
2,387,806	-		CCNA_02237	0.83	+1.9
2,387,824	+		CCNA_02237	0.83	+2.5
2,387,833	-		CCNA_02237	0.84	+0.8
2,387,861	+		CCNA_02237	0.85	+1.1
2,387,865	+		CCNA_02237	0.85	+0.2
2,387,875	+		CCNA_02237	0.86	+0.9
2,387,880	+		CCNA_02237	0.86	+2.2
2,387,884	+		CCNA_02237	0.86	+1.3
2,387,884	+		CCNA_02237	0.86	+3.4
2,387,889	+		CCNA_02237	0.86	+0.3
2,387,892	-		CCNA_02237	0.87	+1.3
2,387,897	-		CCNA_02237	0.87	+0.3
2,387,920	+		CCNA_02237	0.88	+0.6
2,387,920	+		CCNA_02237	0.88	-1.5
2,388,040	+				+3.9
2,388,053	+				+3.2
2,388,176	+				+1.3
2,388,195	+				+1.9
2,388,195	+				+2.0
2,388,203	-				-0.2
2,388,208	-				-1.7
2,388,218	-				-0.8
2,388,251	+				-0.8
2,388,259	-				-1.1
2,388,291	+				-1.2
2,388,297	+				-0.9
2,388,299	-				-2.2
2,388,299	-				-0.4
2,388,305	-				-0.4
2,388,324	+				-0.2
2,388,346	-				-2.7
2,388,369	-		CCNA_02238	0.20	+1.3
2,388,371	-		CCNA_02238	0.21	+4.2
2,388,380	-		CCNA_02238	0.25	+0.7
2,388,461	+		CCNA_02238	0.64	-0.4
2,388,469	+		CCNA_02238	0.68	-1.6
2,388,469	+		CCNA_02238	0.68	-0.3
2,388,477	-		CCNA_02238	0.72	-0.4
2,388,477	-		CCNA_02238	0.72	+1.1
2,388,504	-		CCNA_02238	0.85	+1.3
2,388,528	+				-0.8
2,388,528	+				-0.8
2,388,540	+				+0.4
2,388,631	+				+0.4
2,388,665	-		CCNA_02239	0.10	-0.4
2,388,675	-		CCNA_02239	0.11	+1.0
2,388,680	-		CCNA_02239	0.12	-0.6
2,388,713	-		CCNA_02239	0.15	+0.2
2,388,748	-		CCNA_02239	0.18	+0.6
2,388,816	+		CCNA_02239	0.23	-0.5
2,388,924	+		CCNA_02239	0.33	+0.7
2,388,932	-		CCNA_02239	0.33	-1.6
2,388,932	-		CCNA_02239	0.33	-0.5
2,388,932	-		CCNA_02239	0.33	-0.3
2,388,932	-		CCNA_02239	0.33	+2.9
2,388,959	+		CCNA_02239	0.36	-0.2
2,388,967	-		CCNA_02239	0.36	-1.4
2,389,039	+		CCNA_02239	0.42	-0.2
2,389,064	+		CCNA_02239	0.45	-0.3
2,389,064	+		CCNA_02239	0.45	-1.3
2,389,064	+		CCNA_02239	0.45	+0.1
2,389,072	-		CCNA_02239	0.45	-0.1
2,389,149	+		CCNA_02239	0.52	+2.9
2,389,163	+				+1.3
2,389,173	-		CCNA_02239	0.54	-1.8
2,389,178	+		CCNA_02239	0.54	+1.7
2,389,218	-		CCNA_02239	0.58	-0.3
2,389,231	-		CCNA_02239	0.59	-1.1
2,389,252	-		CCNA_02239	0.61	-1.7
2,389,274	-		CCNA_02239	0.62	-0.6
2,389,282	+		CCNA_02239	0.63	-2.6
2,389,282	+		CCNA_02239	0.63	-1.7
2,389,282	+		CCNA_02239	0.63	-0.9
2,389,282	+		CCNA_02239	0.63	-1.5
2,389,283	+		CCNA_02239	0.63	-0.4
2,389,290	-		CCNA_02239	0.64	-0.5
2,389,290	-		CCNA_02239	0.64	+1.9
2,389,290	-		CCNA_02239	0.64	+0.1
2,389,290	-		CCNA_02239	0.64	-1.5
2,389,290	-		CCNA_02239	0.64	+1.6
2,389,290	-		CCNA_02239	0.64	+0.4
2,389,291	-		CCNA_02239	0.64	-1.1
2,389,313	+		CCNA_02239	0.66	+1.9
2,389,313	+		CCNA_02239	0.66	-0.4
2,389,313	+		CCNA_02239	0.66	-1.1
2,389,313	+		CCNA_02239	0.66	-0.3
2,389,313	+		CCNA_02239	0.66	+0.9
2,389,321	-		CCNA_02239	0.66	-2.2
2,389,321	-		CCNA_02239	0.66	-0.4
2,389,321	-		CCNA_02239	0.66	+0.5
2,389,321	-		CCNA_02239	0.66	+0.9
2,389,321	-		CCNA_02239	0.66	+3.6
2,389,321	-		CCNA_02239	0.66	+0.3
2,389,380	+		CCNA_02239	0.71	-0.7
2,389,383	-		CCNA_02239	0.72	+0.8
2,389,403	-		CCNA_02239	0.73	+0.7
2,389,431	+		CCNA_02239	0.76	-2.4
2,389,439	-		CCNA_02239	0.76	+0.2
2,389,439	-		CCNA_02239	0.76	-0.7
2,389,442	+		CCNA_02239	0.77	+2.1
2,389,509	+		CCNA_02239	0.82	-1.5
2,389,509	+		CCNA_02239	0.82	-1.7
2,389,514	+		CCNA_02239	0.83	-1.4
2,389,517	-		CCNA_02239	0.83	-1.5
2,389,524	+		CCNA_02239	0.84	-1.1
2,389,524	+		CCNA_02239	0.84	-0.2
2,389,524	+		CCNA_02239	0.84	-2.0
2,389,524	+		CCNA_02239	0.84	+1.1
2,389,527	-		CCNA_02239	0.84	-0.6