Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02127

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,278,630	+		CCNA_02125	0.81	-0.7
2,278,648	-		CCNA_02125	0.81	+1.1
2,278,672	+		CCNA_02125	0.82	+0.3
2,278,680	-		CCNA_02125	0.82	+1.2
2,278,700	-		CCNA_02125	0.83	+1.1
2,278,705	-		CCNA_02125	0.83	+1.0
2,278,732	+		CCNA_02125	0.84	+0.3
2,278,756	-		CCNA_02125	0.85	+2.1
2,278,792	-		CCNA_02125	0.86	+2.3
2,278,792	-		CCNA_02125	0.86	+1.9
2,278,836	-		CCNA_02125	0.88	+2.2
2,278,922	-				+0.9
2,278,996	+				-1.4
2,279,023	+				+0.5
2,279,031	-				+1.6
2,279,052	+				-1.0
2,279,052	+				-2.3
2,279,174	-				+1.4
2,279,174	-				+0.4
2,279,333	-				+2.0
2,279,335	+				-0.6
2,279,358	-				-1.2
2,279,392	-				+0.6
2,279,399	-				-1.2
2,279,413	+				-0.8
2,279,416	-				+0.3
2,279,443	-				+2.2
2,279,467	-		CCNA_02126	0.29	-0.3
2,279,469	+		CCNA_02126	0.30	+0.6
2,279,477	-		CCNA_02126	0.33	-0.6
2,279,605	+				+1.0
2,279,614	+				+1.5
2,279,614	+				+0.5
2,279,614	+				-0.5
2,279,622	-				+1.1
2,279,622	-				-0.0
2,279,662	+				-1.9
2,279,671	-				+0.5
2,279,722	+				-2.9
2,279,722	+				-1.1
2,279,722	+				+0.1
2,279,722	+				-1.0
2,279,725	-				+1.1
2,279,730	-				+0.5
2,279,730	-				+0.2
2,279,730	-				-0.3
2,279,773	-				+0.1
2,279,789	+		CCNA_02127	0.10	-1.7
2,279,797	-		CCNA_02127	0.11	+0.9
2,279,797	-		CCNA_02127	0.11	-0.5
2,279,797	-		CCNA_02127	0.11	+3.3
2,279,806	-		CCNA_02127	0.11	-0.2
2,279,827	-		CCNA_02127	0.13	+0.6
2,279,886	-		CCNA_02127	0.16	+0.9
2,279,935	-		CCNA_02127	0.19	+0.6
2,279,956	+		CCNA_02127	0.20	+2.2
2,279,968	+		CCNA_02127	0.21	-0.9
2,279,973	-		CCNA_02127	0.21	+0.5
2,279,979	+		CCNA_02127	0.22	+0.3
2,279,979	+		CCNA_02127	0.22	+1.6
2,279,979	+		CCNA_02127	0.22	-1.0
2,279,987	-		CCNA_02127	0.22	-0.3
2,280,000	-		CCNA_02127	0.23	+1.3
2,280,004	+		CCNA_02127	0.23	-0.5
2,280,014	+		CCNA_02127	0.24	+0.2
2,280,026	+		CCNA_02127	0.25	-2.3
2,280,034	-		CCNA_02127	0.25	+0.7
2,280,034	-		CCNA_02127	0.25	+1.1
2,280,060	-		CCNA_02127	0.27	+1.7
2,280,102	-		CCNA_02127	0.29	+0.9
2,280,105	+		CCNA_02127	0.29	-0.9
2,280,113	-		CCNA_02127	0.30	-1.2
2,280,135	-		CCNA_02127	0.31	+0.8
2,280,155	+		CCNA_02127	0.32	-0.6
2,280,167	+		CCNA_02127	0.33	+1.3
2,280,214	-		CCNA_02127	0.36	+0.6
2,280,214	-		CCNA_02127	0.36	+1.1
2,280,214	-		CCNA_02127	0.36	+0.4
2,280,248	-		CCNA_02127	0.38	+0.9
2,280,299	-		CCNA_02127	0.41	+0.7
2,280,322	+				+1.8
2,280,324	+		CCNA_02127	0.43	-1.6
2,280,349	-		CCNA_02127	0.44	+0.9
2,280,349	-		CCNA_02127	0.44	+0.3
2,280,369	-		CCNA_02127	0.45	+1.2
2,280,388	+		CCNA_02127	0.46	-1.8
2,280,388	+		CCNA_02127	0.46	+0.2
2,280,396	-		CCNA_02127	0.47	+1.4
2,280,396	-		CCNA_02127	0.47	+0.7
2,280,415	-		CCNA_02127	0.48	+0.5
2,280,434	+		CCNA_02127	0.49	-0.9
2,280,434	+		CCNA_02127	0.49	-1.3
2,280,434	+		CCNA_02127	0.49	-0.3
2,280,442	-		CCNA_02127	0.50	+1.2
2,280,442	-		CCNA_02127	0.50	+1.1
2,280,442	-		CCNA_02127	0.50	+1.2
2,280,442	-		CCNA_02127	0.50	+1.4
2,280,516	+		CCNA_02127	0.54	-2.7
2,280,523	+		CCNA_02127	0.55	-0.2
2,280,593	+		CCNA_02127	0.59	+0.5
2,280,601	-		CCNA_02127	0.59	+0.6
2,280,612	-		CCNA_02127	0.60	+0.7
2,280,614	+		CCNA_02127	0.60	-0.2
2,280,700	+		CCNA_02127	0.65	-2.0
2,280,708	+		CCNA_02127	0.66	-1.2
2,280,737	+		CCNA_02127	0.67	+2.2
2,280,744	-		CCNA_02127	0.68	+0.4
2,280,773	+		CCNA_02127	0.70	-2.1
2,280,825	-		CCNA_02127	0.73	+0.9
2,280,825	-		CCNA_02127	0.73	+0.7
2,280,825	-		CCNA_02127	0.73	+0.9
2,280,826	-		CCNA_02127	0.73	+1.1
2,280,881	+		CCNA_02127	0.76	-0.5
2,280,881	+		CCNA_02127	0.76	-0.9
2,280,889	-		CCNA_02127	0.77	+1.5
2,280,935	-		CCNA_02127	0.79	+0.1
2,280,970	+		CCNA_02127	0.81	-0.3
2,281,015	+		CCNA_02127	0.84	-0.9
2,281,023	-		CCNA_02127	0.85	+1.1
2,281,035	-		CCNA_02127	0.85	+0.7
2,281,037	+		CCNA_02127	0.85	-1.2
2,281,056	+		CCNA_02127	0.87	-0.6
2,281,056	+		CCNA_02127	0.87	-0.3
2,281,064	-		CCNA_02127	0.87	+1.3
2,281,064	-		CCNA_02127	0.87	+0.2
2,281,071	-		CCNA_02127	0.87	+1.1
2,281,084	+		CCNA_02127	0.88	+0.4
2,281,092	-		CCNA_02127	0.89	+2.9
2,281,125	+				-0.9
2,281,138	+				-1.8
2,281,238	-				+0.9
2,281,258	+				+1.8
2,281,258	+				+1.2
2,281,266	-				+1.5
2,281,284	-				+0.8
2,281,410	-				+0.8
2,281,414	-				-0.5
2,281,435	+				+0.5
2,281,443	+				-1.8
2,281,444	+				-1.3
2,281,452	-				+1.1
2,281,457	-				-0.9
2,281,557	-				-0.9
2,281,585	+		CCNA_02128	0.11	+0.1
2,281,614	+		CCNA_02128	0.13	-0.6
2,281,635	+		CCNA_02128	0.15	+0.5
2,281,635	+		CCNA_02128	0.15	-0.3
2,281,645	+		CCNA_02128	0.16	+0.2
2,281,691	-		CCNA_02128	0.20	+1.7
2,281,691	-		CCNA_02128	0.20	-0.7
2,281,698	-		CCNA_02128	0.20	-2.2
2,281,698	-		CCNA_02128	0.20	-1.8
2,281,724	+		CCNA_02128	0.22	-0.2
2,281,732	-		CCNA_02128	0.23	+1.0
2,281,741	+		CCNA_02128	0.24	-0.5
2,281,741	+		CCNA_02128	0.24	-0.3
2,281,749	-		CCNA_02128	0.25	-0.8
2,281,780	-		CCNA_02128	0.27	-0.7
2,281,838	+		CCNA_02128	0.32	-0.9
2,281,880	+		CCNA_02128	0.35	-1.0
2,281,887	-		CCNA_02128	0.36	-0.9
2,281,910	-		CCNA_02128	0.38	+0.7
2,281,910	-		CCNA_02128	0.38	+1.9
2,281,914	+		CCNA_02128	0.38	-1.2
2,281,914	+		CCNA_02128	0.38	-0.1
2,281,914	+		CCNA_02128	0.38	-2.7
2,281,950	+		CCNA_02128	0.41	-0.8
2,282,065	+		CCNA_02128	0.51	-1.5
2,282,088	+		CCNA_02128	0.53	-1.7
2,282,127	-		CCNA_02128	0.56	+0.0
2,282,139	+		CCNA_02128	0.57	+2.2
2,282,154	-		CCNA_02128	0.58	-1.1
2,282,169	-		CCNA_02128	0.59	+0.1
2,282,174	-		CCNA_02128	0.60	+0.2
2,282,190	+		CCNA_02128	0.61	-0.9
2,282,197	+		CCNA_02128	0.62	-0.2
2,282,209	+		CCNA_02128	0.63	+0.5
2,282,217	-		CCNA_02128	0.63	-0.1
2,282,217	-		CCNA_02128	0.63	+0.1
2,282,233	-		CCNA_02128	0.65	-2.8