Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02044

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,189,173	-		CCNA_02043	0.33	-0.6
2,189,175	+		CCNA_02043	0.33	-0.7
2,189,199	-		CCNA_02043	0.35	-1.8
2,189,230	+		CCNA_02043	0.37	+0.3
2,189,271	-		CCNA_02043	0.40	-0.4
2,189,273	+		CCNA_02043	0.40	-1.4
2,189,273	+		CCNA_02043	0.40	+0.0
2,189,281	-		CCNA_02043	0.40	-0.2
2,189,293	+		CCNA_02043	0.41	+0.7
2,189,373	+		CCNA_02043	0.47	+2.0
2,189,398	+		CCNA_02043	0.49	-1.3
2,189,445	-		CCNA_02043	0.52	+1.2
2,189,458	-		CCNA_02043	0.53	+1.0
2,189,463	-		CCNA_02043	0.53	-0.8
2,189,466	-		CCNA_02043	0.53	+0.2
2,189,495	+		CCNA_02043	0.55	-0.8
2,189,502	+				+2.4
2,189,502	+		CCNA_02043	0.56	+0.8
2,189,555	-		CCNA_02043	0.59	-1.4
2,189,560	+		CCNA_02043	0.60	+2.4
2,189,562	+		CCNA_02043	0.60	-1.2
2,189,568	-		CCNA_02043	0.60	+1.2
2,189,573	+		CCNA_02043	0.61	-0.8
2,189,587	-		CCNA_02043	0.62	+3.4
2,189,594	+		CCNA_02043	0.62	-1.4
2,189,635	-		CCNA_02043	0.65	-1.0
2,189,649	+		CCNA_02043	0.66	+0.4
2,189,804	+		CCNA_02043	0.77	-0.8
2,189,804	+		CCNA_02043	0.77	+0.2
2,189,804	+		CCNA_02043	0.77	-0.8
2,189,840	+		CCNA_02043	0.79	-0.3
2,189,840	+		CCNA_02043	0.79	+1.3
2,189,848	-		CCNA_02043	0.80	+0.8
2,189,848	-		CCNA_02043	0.80	-1.1
2,189,848	-		CCNA_02043	0.80	-1.1
2,189,850	+		CCNA_02043	0.80	+3.4
2,189,868	-		CCNA_02043	0.81	-0.5
2,189,898	+		CCNA_02043	0.83	+0.8
2,189,952	+				+1.2
2,189,962	-		CCNA_02043	0.87	-0.6
2,189,962	-		CCNA_02043	0.87	+1.7
2,189,989	+		CCNA_02043	0.89	-0.8
2,189,989	+		CCNA_02043	0.89	+1.2
2,189,997	-		CCNA_02043	0.90	-0.5
2,190,031	-				+0.0
2,190,034	+				-1.5
2,190,055	+				-0.7
2,190,068	+				+0.1
2,190,082	+				-1.5
2,190,125	+				-1.4
2,190,125	+				-0.9
2,190,139	+				+1.7
2,190,151	+				-0.6
2,190,159	+				-0.2
2,190,159	-				-0.5
2,190,159	-				-0.1
2,190,174	-				+0.8
2,190,174	-				-1.1
2,190,174	-				-1.0
2,190,203	-				+3.0
2,190,223	-		CCNA_02044	0.12	-1.2
2,190,268	-		CCNA_02044	0.20	+0.2
2,190,295	+		CCNA_02044	0.25	-0.4
2,190,295	+		CCNA_02044	0.25	+1.0
2,190,295	+		CCNA_02044	0.25	-2.2
2,190,298	-		CCNA_02044	0.25	-0.6
2,190,303	-				+3.0
2,190,321	+		CCNA_02044	0.29	+0.2
2,190,343	-		CCNA_02044	0.33	+1.0
2,190,359	+		CCNA_02044	0.36	+1.0
2,190,364	+		CCNA_02044	0.37	-0.1
2,190,367	-		CCNA_02044	0.37	-1.7
2,190,372	-		CCNA_02044	0.38	-1.2
2,190,373	+		CCNA_02044	0.38	-0.9
2,190,420	-		CCNA_02044	0.47	-1.3
2,190,449	+		CCNA_02044	0.52	-0.5
2,190,457	-		CCNA_02044	0.53	+0.0
2,190,475	-		CCNA_02044	0.56	-0.5
2,190,489	+		CCNA_02044	0.59	-1.3
2,190,499	-		CCNA_02044	0.61	+2.3
2,190,501	+		CCNA_02044	0.61	-0.3
2,190,508	+		CCNA_02044	0.62	-1.0
2,190,508	+		CCNA_02044	0.62	+1.2
2,190,516	-		CCNA_02044	0.64	+0.5
2,190,565	+		CCNA_02044	0.72	-1.8
2,190,565	+		CCNA_02044	0.72	-1.4
2,190,572	+		CCNA_02044	0.73	-0.5
2,190,572	+		CCNA_02044	0.73	-1.0
2,190,573	-		CCNA_02044	0.74	-0.9
2,190,598	+		CCNA_02044	0.78	-1.3
2,190,599	+		CCNA_02044	0.78	-0.1
2,190,606	-		CCNA_02044	0.79	-0.6
2,190,620	+		CCNA_02044	0.82	+1.0
2,190,620	+		CCNA_02044	0.82	+0.2
2,190,625	+		CCNA_02044	0.83	+0.3
2,190,628	-		CCNA_02044	0.83	+3.5
2,190,628	-		CCNA_02044	0.83	+3.7
2,190,628	-		CCNA_02044	0.83	+3.4
2,190,628	-		CCNA_02044	0.83	+3.1
2,190,628	-		CCNA_02044	0.83	+4.8
2,190,628	-		CCNA_02044	0.83	+3.6
2,190,628	-		CCNA_02044	0.83	+3.2
2,190,633	-		CCNA_02044	0.84	-0.3
2,190,633	-		CCNA_02044	0.84	+1.4
2,190,634	-		CCNA_02044	0.84	-0.9
2,190,636	+		CCNA_02044	0.85	-1.2
2,190,636	+		CCNA_02044	0.85	-0.9
2,190,636	+		CCNA_02044	0.85	+1.0
2,190,641	+		CCNA_02044	0.85	-0.8
2,190,643	-		CCNA_02044	0.86	-0.5
2,190,644	-		CCNA_02044	0.86	+0.1
2,190,644	-		CCNA_02044	0.86	+0.3
2,190,644	-		CCNA_02044	0.86	+1.5
2,190,651	+		CCNA_02044	0.87	+0.3
2,190,671	-				-0.4
2,190,687	-				+1.6
2,190,718	+				-1.4
2,190,727	+				+0.2
2,190,736	+				+0.3
2,190,737	+				-0.5
2,190,770	+				-1.9
2,190,772	-				+1.8
2,190,778	+				+0.0
2,190,786	-				+0.2
2,190,786	-				-0.7
2,190,786	-				+0.2
2,190,805	-				+0.8
2,190,812	-				+1.7
2,190,812	-				-1.2
2,190,822	-				+0.7
2,190,831	+				-1.9
2,190,887	+		CCNA_02045	0.10	+0.0
2,190,900	+		CCNA_02045	0.11	-0.5
2,190,938	+		CCNA_02045	0.13	-2.0
2,190,940	+		CCNA_02045	0.14	-0.2
2,190,945	+		CCNA_02045	0.14	+0.5
2,190,945	+		CCNA_02045	0.14	-0.1
2,190,948	-		CCNA_02045	0.14	-1.6
2,190,948	-		CCNA_02045	0.14	+0.8
2,190,948	-		CCNA_02045	0.14	+0.2
2,190,948	-		CCNA_02045	0.14	-0.6
2,190,948	-		CCNA_02045	0.14	-0.5
2,190,988	+		CCNA_02045	0.17	-1.0
2,190,988	+		CCNA_02045	0.17	-0.3
2,190,988	+		CCNA_02045	0.17	+1.7
2,190,988	+		CCNA_02045	0.17	-0.6
2,190,996	-		CCNA_02045	0.17	+0.3
2,190,996	-		CCNA_02045	0.17	-0.9
2,190,996	-		CCNA_02045	0.17	-1.4
2,190,998	+		CCNA_02045	0.17	+0.0
2,191,030	-		CCNA_02045	0.19	-0.6
2,191,042	-		CCNA_02045	0.20	+0.0
2,191,052	-		CCNA_02045	0.21	+0.5
2,191,065	-		CCNA_02045	0.22	-0.4
2,191,101	-		CCNA_02045	0.24	-0.8
2,191,116	-		CCNA_02045	0.25	-1.5
2,191,136	+		CCNA_02045	0.26	+1.4
2,191,157	+		CCNA_02045	0.28	-0.6
2,191,159	+		CCNA_02045	0.28	+1.0
2,191,257	-		CCNA_02045	0.34	+0.2
2,191,262	+		CCNA_02045	0.34	-1.2
2,191,267	-		CCNA_02045	0.35	-1.0
2,191,287	-		CCNA_02045	0.36	+2.7
2,191,287	-		CCNA_02045	0.36	+3.3
2,191,304	+		CCNA_02045	0.37	-1.0
2,191,314	+		CCNA_02045	0.38	+0.7
2,191,317	-		CCNA_02045	0.38	-0.8
2,191,459	-		CCNA_02045	0.47	-1.0
2,191,482	+		CCNA_02045	0.49	+0.1
2,191,498	+		CCNA_02045	0.50	-1.0
2,191,502	+		CCNA_02045	0.50	-0.5
2,191,528	-		CCNA_02045	0.52	+0.3
2,191,540	+		CCNA_02045	0.52	+0.0
2,191,557	+		CCNA_02045	0.53	+1.4
2,191,565	-		CCNA_02045	0.54	-1.6
2,191,642	-		CCNA_02045	0.59	-1.8
2,191,646	-		CCNA_02045	0.59	+0.3
2,191,700	-		CCNA_02045	0.63	+0.1