Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01185

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
1,303,099	+		CCNA_01183	0.48	+1.5
1,303,107	-		CCNA_01183	0.49	-1.8
1,303,107	-		CCNA_01183	0.49	+0.3
1,303,107	-		CCNA_01183	0.49	-0.2
1,303,110	+		CCNA_01183	0.49	-0.5
1,303,117	-		CCNA_01183	0.50	+1.3
1,303,127	-		CCNA_01183	0.51	-0.5
1,303,127	-		CCNA_01183	0.51	-1.8
1,303,138	+		CCNA_01183	0.52	-1.4
1,303,189	+		CCNA_01183	0.57	+0.2
1,303,204	+		CCNA_01183	0.58	+0.7
1,303,207	-		CCNA_01183	0.59	-0.1
1,303,237	+		CCNA_01183	0.61	+1.7
1,303,237	+		CCNA_01183	0.61	+0.7
1,303,270	+		CCNA_01183	0.65	+1.8
1,303,278	-		CCNA_01183	0.65	+1.7
1,303,278	-		CCNA_01183	0.65	-0.6
1,303,278	-		CCNA_01183	0.65	+1.3
1,303,280	+		CCNA_01183	0.66	+1.5
1,303,280	+		CCNA_01183	0.66	+1.8
1,303,332	+		CCNA_01183	0.71	-1.1
1,303,347	-		CCNA_01183	0.72	-0.0
1,303,355	+		CCNA_01183	0.73	+2.0
1,303,355	+		CCNA_01183	0.73	+2.4
1,303,355	+				+2.5
1,303,370	+		CCNA_01183	0.74	+2.8
1,303,464	+		CCNA_01183	0.83	+1.3
1,303,464	-				+2.1
1,303,469	+		CCNA_01183	0.84	+2.0
1,303,469	+		CCNA_01183	0.84	+1.0
1,303,472	-		CCNA_01183	0.84	+0.4
1,303,482	-		CCNA_01183	0.85	-0.4
1,303,567	+				+1.6
1,303,580	+				+2.3
1,303,663	+				+2.1
1,303,681	-				-0.8
1,303,707	+		CCNA_01184	0.15	+1.4
1,303,707	+		CCNA_01184	0.15	+2.8
1,303,707	+		CCNA_01184	0.15	+2.0
1,303,707	+				+4.1
1,303,707	+		CCNA_01184	0.15	+2.8
1,303,707	+		CCNA_01184	0.15	+1.7
1,303,715	-		CCNA_01184	0.17	+0.5
1,303,717	+		CCNA_01184	0.17	+2.1
1,303,722	+		CCNA_01184	0.18	+2.7
1,303,725	-		CCNA_01184	0.19	+0.1
1,303,731	+		CCNA_01184	0.20	+1.2
1,303,732	+		CCNA_01184	0.20	+0.0
1,303,754	+		CCNA_01184	0.25	+0.6
1,303,759	-				+2.5
1,303,767	-		CCNA_01184	0.28	-1.0
1,303,768	+		CCNA_01184	0.28	+1.8
1,303,776	-		CCNA_01184	0.30	-0.2
1,303,882	-		CCNA_01184	0.54	+1.7
1,303,885	+		CCNA_01184	0.55	+1.3
1,303,896	+		CCNA_01184	0.57	+1.8
1,303,954	+		CCNA_01184	0.70	+1.6
1,303,960	-		CCNA_01184	0.71	-0.2
1,303,962	-		CCNA_01184	0.72	-0.6
1,303,973	+		CCNA_01184	0.74	+2.1
1,303,973	+		CCNA_01184	0.74	+2.3
1,303,981	-				+1.3
1,303,988	-		CCNA_01184	0.78	+0.6
1,304,000	+		CCNA_01184	0.80	+0.1
1,304,000	+		CCNA_01184	0.80	+0.3
1,304,005	+		CCNA_01184	0.81	+2.1
1,304,005	+		CCNA_01184	0.81	+0.9
1,304,008	-		CCNA_01184	0.82	-1.2
1,304,013	-		CCNA_01184	0.83	+2.2
1,304,013	-		CCNA_01184	0.83	-1.0
1,304,013	-		CCNA_01184	0.83	-1.4
1,304,026	+		CCNA_01184	0.86	+1.3
1,304,036	+		CCNA_01184	0.88	+1.6
1,304,036	+		CCNA_01184	0.88	+0.2
1,304,046	+				-0.2
1,304,059	-				-1.4
1,304,080	-				-0.8
1,304,082	+				-1.5
1,304,136	+		CCNA_01185	0.12	+0.2
1,304,145	-		CCNA_01185	0.15	+1.4
1,304,148	+		CCNA_01185	0.16	+0.8
1,304,171	+		CCNA_01185	0.22	+2.5
1,304,171	+		CCNA_01185	0.22	-1.1
1,304,202	-		CCNA_01185	0.31	+0.4
1,304,212	-		CCNA_01185	0.34	+1.5
1,304,229	+		CCNA_01185	0.39	-1.7
1,304,229	+		CCNA_01185	0.39	+2.1
1,304,237	-		CCNA_01185	0.41	-0.2
1,304,237	-		CCNA_01185	0.41	-0.4
1,304,237	-		CCNA_01185	0.41	-1.3
1,304,280	-		CCNA_01185	0.53	-2.4
1,304,296	+		CCNA_01185	0.58	+0.9
1,304,319	+		CCNA_01185	0.64	+0.9
1,304,319	+		CCNA_01185	0.64	+2.4
1,304,327	-		CCNA_01185	0.67	+0.5
1,304,399	+		CCNA_01185	0.87	-0.4
1,304,399	+		CCNA_01185	0.87	-1.0
1,304,404	+		CCNA_01185	0.89	+2.2
1,304,407	-		CCNA_01185	0.89	+0.1
1,304,444	+				+0.9
1,304,452	-				+0.7
1,304,492	-				-0.3
1,304,585	+				-0.9
1,304,653	+				+1.5
1,304,653	+				+0.3
1,304,684	+				+2.2
1,304,693	+				+0.6
1,304,721	+				+1.9
1,304,842	+		CCNA_01186	0.44	+3.4
1,304,842	+		CCNA_01186	0.44	+3.5
1,304,842	+		CCNA_01186	0.44	+2.7
1,304,842	+		CCNA_01186	0.44	+3.0
1,304,850	-		CCNA_01186	0.46	+0.7
1,304,850	-		CCNA_01186	0.46	+0.1
1,304,854	+		CCNA_01186	0.48	+3.2
1,304,884	-		CCNA_01186	0.57	-0.3
1,304,886	+		CCNA_01186	0.58	+3.1
1,304,912	-		CCNA_01186	0.66	+3.6
1,305,052	+				+1.8
1,305,057	+				+2.2
1,305,070	+				-1.4
1,305,090	+				+0.1
1,305,118	+				-1.6
1,305,126	-				+0.5
1,305,164	+				+0.9
1,305,181	+				-0.3
1,305,181	+				+0.1
1,305,181	+				+0.5
1,305,189	-				+1.4
1,305,206	+				+1.3
1,305,218	+				+0.8
1,305,234	-				-0.7
1,305,241	-				+0.1
1,305,271	+		CCNA_01187	0.15	+2.2
1,305,271	+		CCNA_01187	0.15	-1.6
1,305,279	-		CCNA_01187	0.16	-0.0
1,305,279	-		CCNA_01187	0.16	-0.4
1,305,279	-		CCNA_01187	0.16	-0.5
1,305,303	-		CCNA_01187	0.21	+1.5
1,305,303	-		CCNA_01187	0.21	-0.8
1,305,315	+		CCNA_01187	0.23	-0.6
1,305,323	-		CCNA_01187	0.24	+0.7
1,305,327	+		CCNA_01187	0.25	-1.1
1,305,345	-		CCNA_01187	0.28	-0.1
1,305,347	+		CCNA_01187	0.29	-2.1
1,305,348	+		CCNA_01187	0.29	+0.3
1,305,353	+		CCNA_01187	0.30	+0.7
1,305,355	-		CCNA_01187	0.30	-2.2
1,305,365	+		CCNA_01187	0.32	+0.6
1,305,365	+		CCNA_01187	0.32	+0.5
1,305,365	+		CCNA_01187	0.32	+0.6
1,305,365	+		CCNA_01187	0.32	-0.1
1,305,365	+		CCNA_01187	0.32	-0.3
1,305,365	+		CCNA_01187	0.32	-0.5
1,305,373	-		CCNA_01187	0.33	+0.6
1,305,373	-		CCNA_01187	0.33	-0.9
1,305,395	+		CCNA_01187	0.37	-1.2
1,305,409	+		CCNA_01187	0.40	+0.4
1,305,409	+		CCNA_01187	0.40	+0.6
1,305,409	+		CCNA_01187	0.40	+0.1