Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS17995 and ABZR86_RS18000 are separated by 109 nucleotides ABZR86_RS18000 and ABZR86_RS18005 are separated by 47 nucleotides ABZR86_RS18005 and ABZR86_RS18010 are separated by 118 nucleotides
ABZR86_RS17995: ABZR86_RS17995 - helix-turn-helix domain-containing protein, at 14,274 to 15,239
_RS17995
ABZR86_RS18000: ABZR86_RS18000 - putative quinol monooxygenase, at 15,349 to 15,651
_RS18000
ABZR86_RS18005: ABZR86_RS18005 - YbhB/YbcL family Raf kinase inhibitor-like protein, at 15,699 to 16,328
_RS18005
ABZR86_RS18010: ABZR86_RS18010 - aldo/keto reductase, at 16,447 to 17,259
_RS18010
Position (kb)
15
16
17 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 15.064 kb on - strand, within ABZR86_RS17995 at 15.251 kb on + strand at 15.298 kb on + strand at 15.663 kb on + strand at 15.682 kb on - strand at 16.171 kb on - strand, within ABZR86_RS18005 at 16.178 kb on + strand, within ABZR86_RS18005 at 16.178 kb on + strand, within ABZR86_RS18005 at 16.179 kb on - strand, within ABZR86_RS18005 at 16.185 kb on + strand, within ABZR86_RS18005 at 16.186 kb on - strand, within ABZR86_RS18005 at 16.186 kb on - strand, within ABZR86_RS18005 at 16.307 kb on + strand at 16.435 kb on + strand at 16.436 kb on - strand at 16.508 kb on - strand at 16.602 kb on + strand, within ABZR86_RS18010 at 16.615 kb on + strand, within ABZR86_RS18010 at 16.615 kb on + strand, within ABZR86_RS18010 at 16.616 kb on - strand, within ABZR86_RS18010 at 16.786 kb on - strand, within ABZR86_RS18010 at 16.786 kb on - strand, within ABZR86_RS18010 at 16.786 kb on - strand, within ABZR86_RS18010 at 16.811 kb on + strand, within ABZR86_RS18010 at 16.811 kb on + strand, within ABZR86_RS18010 at 16.852 kb on + strand, within ABZR86_RS18010 at 16.871 kb on - strand, within ABZR86_RS18010 at 16.885 kb on + strand, within ABZR86_RS18010 at 17.322 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 15,064 - ABZR86_RS17995 0.82 -1.0 15,251 + +0.5 15,298 + +0.1 15,663 + -0.1 15,682 - -0.2 16,171 - ABZR86_RS18005 0.75 -1.5 16,178 + ABZR86_RS18005 0.76 +0.2 16,178 + ABZR86_RS18005 0.76 +0.3 16,179 - ABZR86_RS18005 0.76 -0.2 16,185 + ABZR86_RS18005 0.77 -1.9 16,186 - ABZR86_RS18005 0.77 -2.4 16,186 - ABZR86_RS18005 0.77 +0.4 16,307 + +0.1 16,435 + -0.0 16,436 - -1.8 16,508 - +0.4 16,602 + ABZR86_RS18010 0.19 -0.3 16,615 + ABZR86_RS18010 0.21 +0.4 16,615 + ABZR86_RS18010 0.21 -0.0 16,616 - ABZR86_RS18010 0.21 +0.2 16,786 - ABZR86_RS18010 0.42 -0.8 16,786 - ABZR86_RS18010 0.42 -3.1 16,786 - ABZR86_RS18010 0.42 +0.0 16,811 + ABZR86_RS18010 0.45 +0.7 16,811 + ABZR86_RS18010 0.45 -1.8 16,852 + ABZR86_RS18010 0.50 +0.5 16,871 - ABZR86_RS18010 0.52 -0.6 16,885 + ABZR86_RS18010 0.54 -0.1 17,322 - -0.5
Or see this region's nucleotide sequence