Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS09730 and ABZR86_RS09735 overlap by 4 nucleotides ABZR86_RS09735 and ABZR86_RS09740 are separated by 15 nucleotides ABZR86_RS09740 and ABZR86_RS09745 are separated by 246 nucleotides ABZR86_RS09745 and ABZR86_RS09750 are separated by 76 nucleotides
ABZR86_RS09730: ABZR86_RS09730 - flagellar hook-basal body complex protein, at 2,164,246 to 2,165,061
_RS09730
ABZR86_RS09735: ABZR86_RS09735 - hypothetical protein, at 2,165,058 to 2,165,291
_RS09735
ABZR86_RS09740: ABZR86_RS09740 - flagellar hook-basal body complex protein FliE, at 2,165,307 to 2,165,624
_RS09740
ABZR86_RS09745: ABZR86_RS09745 - tRNA-Val, at 2,165,871 to 2,165,945
_RS09745
ABZR86_RS09750: ABZR86_RS09750 - excinuclease ABC subunit UvrB, at 2,166,022 to 2,168,043
_RS09750
Position (kb)
2165
2166 Strain fitness (log2 ratio)
-1
0
1 at 2164.372 kb on + strand, within ABZR86_RS09730 at 2164.373 kb on - strand, within ABZR86_RS09730 at 2164.373 kb on - strand, within ABZR86_RS09730 at 2164.399 kb on + strand, within ABZR86_RS09730 at 2164.399 kb on + strand, within ABZR86_RS09730 at 2164.399 kb on + strand, within ABZR86_RS09730 at 2164.399 kb on + strand, within ABZR86_RS09730 at 2164.399 kb on + strand, within ABZR86_RS09730 at 2164.400 kb on - strand, within ABZR86_RS09730 at 2164.400 kb on - strand, within ABZR86_RS09730 at 2164.400 kb on - strand, within ABZR86_RS09730 at 2164.400 kb on - strand, within ABZR86_RS09730 at 2164.400 kb on - strand, within ABZR86_RS09730 at 2164.400 kb on - strand, within ABZR86_RS09730 at 2164.525 kb on + strand, within ABZR86_RS09730 at 2164.525 kb on + strand, within ABZR86_RS09730 at 2164.525 kb on + strand, within ABZR86_RS09730 at 2164.525 kb on + strand, within ABZR86_RS09730 at 2164.526 kb on - strand, within ABZR86_RS09730 at 2164.526 kb on - strand, within ABZR86_RS09730 at 2164.601 kb on - strand, within ABZR86_RS09730 at 2164.601 kb on - strand, within ABZR86_RS09730 at 2164.620 kb on + strand, within ABZR86_RS09730 at 2164.756 kb on + strand, within ABZR86_RS09730 at 2164.756 kb on + strand, within ABZR86_RS09730 at 2164.756 kb on + strand, within ABZR86_RS09730 at 2164.756 kb on + strand, within ABZR86_RS09730 at 2164.757 kb on - strand, within ABZR86_RS09730 at 2164.757 kb on - strand, within ABZR86_RS09730 at 2164.757 kb on - strand, within ABZR86_RS09730 at 2164.757 kb on - strand, within ABZR86_RS09730 at 2164.758 kb on + strand, within ABZR86_RS09730 at 2164.759 kb on - strand, within ABZR86_RS09730 at 2164.858 kb on + strand, within ABZR86_RS09730 at 2164.858 kb on + strand, within ABZR86_RS09730 at 2164.858 kb on + strand, within ABZR86_RS09730 at 2164.859 kb on - strand, within ABZR86_RS09730 at 2164.859 kb on - strand, within ABZR86_RS09730 at 2164.859 kb on - strand, within ABZR86_RS09730 at 2164.890 kb on + strand, within ABZR86_RS09730 at 2164.891 kb on - strand, within ABZR86_RS09730 at 2164.891 kb on - strand, within ABZR86_RS09730 at 2165.017 kb on + strand at 2165.017 kb on + strand at 2165.017 kb on + strand at 2165.017 kb on + strand at 2165.017 kb on + strand at 2165.017 kb on + strand at 2165.017 kb on + strand at 2165.017 kb on + strand at 2165.018 kb on - strand at 2165.018 kb on - strand at 2165.018 kb on - strand at 2165.018 kb on - strand at 2165.018 kb on - strand at 2165.018 kb on - strand at 2165.018 kb on - strand at 2165.018 kb on - strand at 2165.018 kb on - strand at 2165.018 kb on - strand at 2165.018 kb on - strand at 2165.018 kb on - strand at 2165.737 kb on - strand at 2165.824 kb on - strand at 2165.824 kb on - strand at 2165.867 kb on + strand at 2165.867 kb on + strand at 2165.867 kb on + strand at 2165.868 kb on - strand at 2166.107 kb on + strand at 2166.107 kb on + strand at 2166.107 kb on + strand at 2166.107 kb on + strand at 2166.107 kb on + strand at 2166.107 kb on + strand at 2166.107 kb on + strand at 2166.108 kb on - strand at 2166.108 kb on - strand at 2166.108 kb on - strand at 2166.108 kb on - strand at 2166.108 kb on - strand at 2166.108 kb on - strand at 2166.108 kb on - strand at 2166.311 kb on + strand, within ABZR86_RS09750 at 2166.311 kb on + strand, within ABZR86_RS09750 at 2166.312 kb on - strand, within ABZR86_RS09750 at 2166.312 kb on - strand, within ABZR86_RS09750 at 2166.312 kb on - strand, within ABZR86_RS09750 at 2166.386 kb on + strand, within ABZR86_RS09750 at 2166.387 kb on - strand, within ABZR86_RS09750 at 2166.620 kb on + strand, within ABZR86_RS09750 at 2166.620 kb on + strand, within ABZR86_RS09750
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,164,372 + ABZR86_RS09730 0.15 -0.7 2,164,373 - ABZR86_RS09730 0.16 -0.4 2,164,373 - ABZR86_RS09730 0.16 +0.2 2,164,399 + ABZR86_RS09730 0.19 +0.6 2,164,399 + ABZR86_RS09730 0.19 -0.1 2,164,399 + ABZR86_RS09730 0.19 -0.4 2,164,399 + ABZR86_RS09730 0.19 -0.6 2,164,399 + ABZR86_RS09730 0.19 -1.6 2,164,400 - ABZR86_RS09730 0.19 +0.0 2,164,400 - ABZR86_RS09730 0.19 +0.7 2,164,400 - ABZR86_RS09730 0.19 +0.4 2,164,400 - ABZR86_RS09730 0.19 -0.8 2,164,400 - ABZR86_RS09730 0.19 +0.7 2,164,400 - ABZR86_RS09730 0.19 +0.9 2,164,525 + ABZR86_RS09730 0.34 -0.1 2,164,525 + ABZR86_RS09730 0.34 +0.2 2,164,525 + ABZR86_RS09730 0.34 +0.3 2,164,525 + ABZR86_RS09730 0.34 -0.0 2,164,526 - ABZR86_RS09730 0.34 -0.1 2,164,526 - ABZR86_RS09730 0.34 +0.2 2,164,601 - ABZR86_RS09730 0.44 +0.1 2,164,601 - ABZR86_RS09730 0.44 +0.3 2,164,620 + ABZR86_RS09730 0.46 +0.1 2,164,756 + ABZR86_RS09730 0.62 +0.1 2,164,756 + ABZR86_RS09730 0.62 +0.9 2,164,756 + ABZR86_RS09730 0.62 -0.2 2,164,756 + ABZR86_RS09730 0.62 +0.5 2,164,757 - ABZR86_RS09730 0.63 +0.2 2,164,757 - ABZR86_RS09730 0.63 +0.4 2,164,757 - ABZR86_RS09730 0.63 +0.4 2,164,757 - ABZR86_RS09730 0.63 -0.7 2,164,758 + ABZR86_RS09730 0.63 +0.6 2,164,759 - ABZR86_RS09730 0.63 +0.6 2,164,858 + ABZR86_RS09730 0.75 -0.2 2,164,858 + ABZR86_RS09730 0.75 +0.9 2,164,858 + ABZR86_RS09730 0.75 -1.5 2,164,859 - ABZR86_RS09730 0.75 -0.1 2,164,859 - ABZR86_RS09730 0.75 +0.2 2,164,859 - ABZR86_RS09730 0.75 -0.5 2,164,890 + ABZR86_RS09730 0.79 +0.5 2,164,891 - ABZR86_RS09730 0.79 +1.3 2,164,891 - ABZR86_RS09730 0.79 +0.5 2,165,017 + +1.2 2,165,017 + +0.4 2,165,017 + +0.2 2,165,017 + +0.9 2,165,017 + -0.4 2,165,017 + +0.1 2,165,017 + -1.0 2,165,017 + -0.4 2,165,018 - -0.3 2,165,018 - +0.2 2,165,018 - +0.4 2,165,018 - +0.2 2,165,018 - +0.5 2,165,018 - +0.1 2,165,018 - -0.0 2,165,018 - +0.4 2,165,018 - -0.7 2,165,018 - +0.3 2,165,018 - -0.7 2,165,018 - +0.7 2,165,737 - -0.0 2,165,824 - -0.0 2,165,824 - +0.3 2,165,867 + +0.2 2,165,867 + -1.1 2,165,867 + +0.1 2,165,868 - -0.9 2,166,107 + -0.3 2,166,107 + -0.4 2,166,107 + +0.7 2,166,107 + +0.3 2,166,107 + -0.2 2,166,107 + +0.1 2,166,107 + -0.5 2,166,108 - -0.2 2,166,108 - +1.3 2,166,108 - -1.3 2,166,108 - -0.2 2,166,108 - -0.8 2,166,108 - -0.6 2,166,108 - -0.3 2,166,311 + ABZR86_RS09750 0.14 -0.8 2,166,311 + ABZR86_RS09750 0.14 -0.3 2,166,312 - ABZR86_RS09750 0.14 -0.0 2,166,312 - ABZR86_RS09750 0.14 +0.3 2,166,312 - ABZR86_RS09750 0.14 -1.0 2,166,386 + ABZR86_RS09750 0.18 +0.2 2,166,387 - ABZR86_RS09750 0.18 +0.5 2,166,620 + ABZR86_RS09750 0.30 +0.3 2,166,620 + ABZR86_RS09750 0.30 -0.5
Or see this region's nucleotide sequence