Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS05650 and ABZR86_RS05655 are separated by 145 nucleotides ABZR86_RS05655 and ABZR86_RS05660 are separated by 80 nucleotides ABZR86_RS05660 and ABZR86_RS05665 are separated by 159 nucleotides
ABZR86_RS05650: ABZR86_RS05650 - molecular chaperone DnaK, at 1,276,677 to 1,278,599
_RS05650
ABZR86_RS05655: ABZR86_RS05655 - nucleotide exchange factor GrpE, at 1,278,745 to 1,279,278
_RS05655
ABZR86_RS05660: ABZR86_RS05660 - heat-inducible transcriptional repressor HrcA, at 1,279,359 to 1,280,420
_RS05660
ABZR86_RS05665: ABZR86_RS05665 - DNA repair protein RecN, at 1,280,580 to 1,282,256
_RS05665
Position (kb)
1279
1280
1281 Strain fitness (log2 ratio)
-2
-1
0
1 at 1279.360 kb on + strand at 1279.360 kb on + strand at 1279.360 kb on + strand at 1279.360 kb on + strand at 1279.360 kb on + strand at 1279.360 kb on + strand at 1279.361 kb on - strand at 1279.361 kb on - strand at 1279.361 kb on - strand at 1279.362 kb on + strand at 1279.362 kb on + strand at 1279.362 kb on + strand at 1279.362 kb on + strand at 1279.362 kb on + strand at 1279.362 kb on + strand at 1279.363 kb on - strand at 1279.363 kb on - strand at 1279.363 kb on - strand at 1279.363 kb on - strand at 1279.363 kb on - strand at 1279.363 kb on - strand at 1279.363 kb on - strand at 1279.363 kb on - strand at 1279.363 kb on - strand at 1279.363 kb on - strand at 1279.438 kb on + strand at 1279.438 kb on + strand at 1279.439 kb on - strand at 1279.439 kb on - strand at 1279.439 kb on - strand at 1279.439 kb on - strand at 1279.498 kb on + strand, within ABZR86_RS05660 at 1279.498 kb on + strand, within ABZR86_RS05660 at 1279.498 kb on + strand, within ABZR86_RS05660 at 1279.498 kb on + strand, within ABZR86_RS05660 at 1279.498 kb on + strand, within ABZR86_RS05660 at 1279.498 kb on + strand, within ABZR86_RS05660 at 1279.498 kb on + strand, within ABZR86_RS05660 at 1279.499 kb on - strand, within ABZR86_RS05660 at 1279.499 kb on - strand, within ABZR86_RS05660 at 1279.499 kb on - strand, within ABZR86_RS05660 at 1279.499 kb on - strand, within ABZR86_RS05660 at 1279.499 kb on - strand, within ABZR86_RS05660 at 1279.499 kb on - strand, within ABZR86_RS05660 at 1279.499 kb on - strand, within ABZR86_RS05660 at 1279.499 kb on - strand, within ABZR86_RS05660 at 1279.672 kb on + strand, within ABZR86_RS05660 at 1279.672 kb on + strand, within ABZR86_RS05660 at 1279.673 kb on - strand, within ABZR86_RS05660 at 1279.861 kb on + strand, within ABZR86_RS05660 at 1279.861 kb on + strand, within ABZR86_RS05660 at 1279.861 kb on + strand, within ABZR86_RS05660 at 1279.861 kb on + strand, within ABZR86_RS05660 at 1279.862 kb on - strand, within ABZR86_RS05660 at 1279.862 kb on - strand, within ABZR86_RS05660 at 1279.862 kb on - strand, within ABZR86_RS05660 at 1279.991 kb on + strand, within ABZR86_RS05660 at 1279.992 kb on - strand, within ABZR86_RS05660 at 1280.093 kb on + strand, within ABZR86_RS05660 at 1280.222 kb on + strand, within ABZR86_RS05660 at 1280.222 kb on + strand, within ABZR86_RS05660 at 1280.223 kb on - strand, within ABZR86_RS05660 at 1280.223 kb on - strand, within ABZR86_RS05660 at 1280.223 kb on - strand, within ABZR86_RS05660 at 1280.223 kb on - strand, within ABZR86_RS05660 at 1280.223 kb on - strand, within ABZR86_RS05660 at 1280.350 kb on + strand at 1280.350 kb on + strand at 1280.350 kb on + strand at 1280.350 kb on + strand at 1280.350 kb on + strand at 1280.351 kb on - strand at 1280.351 kb on - strand at 1280.448 kb on + strand at 1280.448 kb on + strand at 1280.448 kb on + strand at 1280.448 kb on + strand at 1280.448 kb on + strand at 1280.449 kb on - strand at 1280.449 kb on - strand at 1280.455 kb on + strand at 1280.455 kb on + strand at 1280.456 kb on - strand at 1280.456 kb on - strand at 1280.456 kb on - strand at 1280.456 kb on - strand at 1280.456 kb on - strand at 1280.456 kb on - strand at 1280.456 kb on - strand at 1280.456 kb on - strand at 1280.456 kb on - strand at 1280.461 kb on + strand at 1280.461 kb on + strand at 1280.461 kb on + strand at 1280.461 kb on + strand at 1280.461 kb on + strand at 1280.462 kb on - strand at 1280.462 kb on - strand at 1280.462 kb on - strand at 1280.548 kb on + strand at 1280.548 kb on + strand at 1280.548 kb on + strand at 1280.548 kb on + strand at 1280.548 kb on + strand at 1280.548 kb on + strand at 1280.548 kb on + strand at 1280.548 kb on + strand at 1280.548 kb on + strand at 1280.548 kb on + strand at 1280.549 kb on - strand at 1280.549 kb on - strand at 1280.549 kb on - strand at 1280.549 kb on - strand at 1280.549 kb on - strand at 1280.549 kb on - strand at 1280.549 kb on - strand at 1280.563 kb on + strand at 1280.563 kb on + strand at 1280.563 kb on + strand at 1280.563 kb on + strand at 1280.563 kb on + strand at 1280.564 kb on - strand at 1280.564 kb on - strand at 1280.564 kb on - strand at 1280.564 kb on - strand at 1280.564 kb on - strand at 1280.595 kb on + strand at 1280.595 kb on + strand at 1280.595 kb on + strand at 1280.595 kb on + strand at 1280.595 kb on + strand at 1280.595 kb on + strand at 1280.617 kb on + strand at 1280.617 kb on + strand at 1280.617 kb on + strand at 1280.617 kb on + strand at 1280.617 kb on + strand at 1280.618 kb on - strand at 1280.618 kb on - strand at 1280.618 kb on - strand at 1280.618 kb on - strand at 1281.027 kb on + strand, within ABZR86_RS05665 at 1281.027 kb on + strand, within ABZR86_RS05665 at 1281.028 kb on - strand, within ABZR86_RS05665 at 1281.028 kb on - strand, within ABZR86_RS05665 at 1281.181 kb on + strand, within ABZR86_RS05665 at 1281.181 kb on + strand, within ABZR86_RS05665 at 1281.182 kb on - strand, within ABZR86_RS05665
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,279,360 + -0.8 1,279,360 + +0.0 1,279,360 + +0.2 1,279,360 + -0.1 1,279,360 + -0.1 1,279,360 + +0.1 1,279,361 - +0.2 1,279,361 - +0.0 1,279,361 - -0.4 1,279,362 + -0.8 1,279,362 + +0.0 1,279,362 + +0.5 1,279,362 + -0.9 1,279,362 + -2.3 1,279,362 + -0.1 1,279,363 - +1.0 1,279,363 - +0.5 1,279,363 - -0.2 1,279,363 - +1.4 1,279,363 - +0.1 1,279,363 - -0.7 1,279,363 - -0.2 1,279,363 - +0.9 1,279,363 - +0.4 1,279,363 - +0.0 1,279,438 + -0.1 1,279,438 + -2.0 1,279,439 - -1.2 1,279,439 - -1.3 1,279,439 - +0.4 1,279,439 - -2.1 1,279,498 + ABZR86_RS05660 0.13 +0.2 1,279,498 + ABZR86_RS05660 0.13 +0.1 1,279,498 + ABZR86_RS05660 0.13 +0.6 1,279,498 + ABZR86_RS05660 0.13 -0.8 1,279,498 + ABZR86_RS05660 0.13 +0.0 1,279,498 + ABZR86_RS05660 0.13 -0.0 1,279,498 + ABZR86_RS05660 0.13 -0.4 1,279,499 - ABZR86_RS05660 0.13 -0.6 1,279,499 - ABZR86_RS05660 0.13 +0.9 1,279,499 - ABZR86_RS05660 0.13 -0.6 1,279,499 - ABZR86_RS05660 0.13 -1.1 1,279,499 - ABZR86_RS05660 0.13 +0.3 1,279,499 - ABZR86_RS05660 0.13 -0.8 1,279,499 - ABZR86_RS05660 0.13 -0.2 1,279,499 - ABZR86_RS05660 0.13 -0.5 1,279,672 + ABZR86_RS05660 0.29 -1.9 1,279,672 + ABZR86_RS05660 0.29 -0.7 1,279,673 - ABZR86_RS05660 0.30 -1.1 1,279,861 + ABZR86_RS05660 0.47 +0.2 1,279,861 + ABZR86_RS05660 0.47 -1.3 1,279,861 + ABZR86_RS05660 0.47 +0.6 1,279,861 + ABZR86_RS05660 0.47 -0.4 1,279,862 - ABZR86_RS05660 0.47 -0.7 1,279,862 - ABZR86_RS05660 0.47 -0.2 1,279,862 - ABZR86_RS05660 0.47 -1.2 1,279,991 + ABZR86_RS05660 0.60 -1.2 1,279,992 - ABZR86_RS05660 0.60 -0.6 1,280,093 + ABZR86_RS05660 0.69 +0.2 1,280,222 + ABZR86_RS05660 0.81 +0.6 1,280,222 + ABZR86_RS05660 0.81 -0.4 1,280,223 - ABZR86_RS05660 0.81 -0.7 1,280,223 - ABZR86_RS05660 0.81 -1.4 1,280,223 - ABZR86_RS05660 0.81 -0.6 1,280,223 - ABZR86_RS05660 0.81 -0.4 1,280,223 - ABZR86_RS05660 0.81 +0.9 1,280,350 + +0.6 1,280,350 + -1.1 1,280,350 + -0.1 1,280,350 + -0.8 1,280,350 + -0.7 1,280,351 - -1.1 1,280,351 - -0.6 1,280,448 + +0.7 1,280,448 + +0.3 1,280,448 + -1.2 1,280,448 + +1.2 1,280,448 + -0.4 1,280,449 - -1.5 1,280,449 - +0.4 1,280,455 + +0.1 1,280,455 + +0.0 1,280,456 - -0.5 1,280,456 - +0.5 1,280,456 - -1.0 1,280,456 - -0.5 1,280,456 - +0.9 1,280,456 - +0.5 1,280,456 - +1.1 1,280,456 - -0.2 1,280,456 - -0.7 1,280,461 + +0.1 1,280,461 + +0.3 1,280,461 + -0.1 1,280,461 + +0.2 1,280,461 + +0.4 1,280,462 - +0.4 1,280,462 - +0.1 1,280,462 - +0.8 1,280,548 + -0.5 1,280,548 + +0.2 1,280,548 + -0.5 1,280,548 + +0.9 1,280,548 + +0.2 1,280,548 + -0.6 1,280,548 + +1.1 1,280,548 + +0.8 1,280,548 + +0.1 1,280,548 + -2.0 1,280,549 - +0.0 1,280,549 - +0.3 1,280,549 - -0.8 1,280,549 - +0.2 1,280,549 - -1.6 1,280,549 - +0.6 1,280,549 - -1.6 1,280,563 + -0.8 1,280,563 + -0.1 1,280,563 + -0.4 1,280,563 + +0.7 1,280,563 + -0.6 1,280,564 - -0.3 1,280,564 - -0.5 1,280,564 - -0.4 1,280,564 - +0.6 1,280,564 - +0.5 1,280,595 + -1.1 1,280,595 + -0.5 1,280,595 + -0.6 1,280,595 + +0.1 1,280,595 + -0.1 1,280,595 + -0.0 1,280,617 + -0.5 1,280,617 + -1.7 1,280,617 + -1.3 1,280,617 + -1.1 1,280,617 + -0.6 1,280,618 - -0.5 1,280,618 - -1.0 1,280,618 - -1.1 1,280,618 - -0.9 1,281,027 + ABZR86_RS05665 0.27 +0.2 1,281,027 + ABZR86_RS05665 0.27 -0.9 1,281,028 - ABZR86_RS05665 0.27 -0.2 1,281,028 - ABZR86_RS05665 0.27 -0.1 1,281,181 + ABZR86_RS05665 0.36 -1.6 1,281,181 + ABZR86_RS05665 0.36 -0.3 1,281,182 - ABZR86_RS05665 0.36 +0.2
Or see this region's nucleotide sequence