Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS04220 and ABZR86_RS04225 are separated by 92 nucleotides ABZR86_RS04225 and ABZR86_RS04230 are separated by 512 nucleotides
ABZR86_RS04220: ABZR86_RS04220 - amino acid adenylation domain-containing protein, at 947,181 to 950,255
_RS04220
ABZR86_RS04225: ABZR86_RS04225 - MbtH family protein, at 950,348 to 950,566
_RS04225
ABZR86_RS04230: ABZR86_RS04230 - amidohydrolase family protein, at 951,079 to 952,584
_RS04230
Position (kb) 950
951 Strain fitness (log2 ratio) -2
-1
0
1 at 949.721 kb on + strand, within ABZR86_RS04220 at 949.721 kb on + strand, within ABZR86_RS04220 at 949.722 kb on - strand, within ABZR86_RS04220 at 949.723 kb on + strand, within ABZR86_RS04220 at 949.723 kb on + strand, within ABZR86_RS04220 at 949.724 kb on - strand, within ABZR86_RS04220 at 949.724 kb on - strand, within ABZR86_RS04220 at 949.724 kb on - strand, within ABZR86_RS04220 at 949.724 kb on - strand, within ABZR86_RS04220 at 949.724 kb on - strand, within ABZR86_RS04220 at 949.732 kb on + strand, within ABZR86_RS04220 at 949.732 kb on + strand, within ABZR86_RS04220 at 949.733 kb on - strand, within ABZR86_RS04220 at 949.733 kb on - strand, within ABZR86_RS04220 at 949.733 kb on - strand, within ABZR86_RS04220 at 949.831 kb on + strand, within ABZR86_RS04220 at 949.831 kb on + strand, within ABZR86_RS04220 at 949.912 kb on + strand, within ABZR86_RS04220 at 949.912 kb on + strand, within ABZR86_RS04220 at 949.913 kb on - strand, within ABZR86_RS04220 at 949.913 kb on - strand, within ABZR86_RS04220 at 949.913 kb on - strand, within ABZR86_RS04220 at 949.913 kb on - strand, within ABZR86_RS04220 at 949.913 kb on - strand, within ABZR86_RS04220 at 949.913 kb on - strand, within ABZR86_RS04220 at 949.933 kb on + strand, within ABZR86_RS04220 at 949.934 kb on - strand, within ABZR86_RS04220 at 949.955 kb on - strand at 949.955 kb on - strand at 949.955 kb on - strand at 949.955 kb on - strand at 950.019 kb on + strand at 950.019 kb on + strand at 950.019 kb on + strand at 950.020 kb on - strand at 950.020 kb on - strand at 950.020 kb on - strand at 950.020 kb on - strand at 950.021 kb on + strand at 950.021 kb on + strand at 950.030 kb on + strand at 950.031 kb on - strand at 950.101 kb on + strand at 950.227 kb on + strand at 950.227 kb on + strand at 950.227 kb on + strand at 950.228 kb on - strand at 950.349 kb on + strand at 950.395 kb on + strand, within ABZR86_RS04225 at 950.395 kb on + strand, within ABZR86_RS04225 at 950.395 kb on + strand, within ABZR86_RS04225 at 950.396 kb on - strand, within ABZR86_RS04225 at 950.407 kb on + strand, within ABZR86_RS04225 at 950.407 kb on + strand, within ABZR86_RS04225 at 950.408 kb on - strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.419 kb on - strand, within ABZR86_RS04225 at 950.419 kb on - strand, within ABZR86_RS04225 at 950.419 kb on - strand, within ABZR86_RS04225 at 950.419 kb on - strand, within ABZR86_RS04225 at 950.419 kb on - strand, within ABZR86_RS04225 at 950.419 kb on - strand, within ABZR86_RS04225 at 950.419 kb on - strand, within ABZR86_RS04225 at 950.617 kb on + strand at 950.617 kb on + strand at 950.719 kb on - strand at 950.740 kb on + strand at 950.741 kb on - strand at 950.743 kb on + strand at 950.743 kb on + strand at 950.743 kb on + strand at 950.743 kb on + strand at 950.743 kb on + strand at 950.744 kb on - strand at 950.744 kb on - strand at 950.744 kb on - strand at 950.765 kb on + strand at 950.765 kb on + strand at 950.766 kb on - strand at 950.826 kb on + strand at 950.826 kb on + strand at 950.826 kb on + strand at 950.826 kb on + strand at 950.827 kb on - strand at 950.878 kb on + strand at 950.911 kb on - strand at 950.911 kb on - strand at 950.962 kb on + strand at 950.963 kb on - strand at 951.090 kb on + strand at 951.090 kb on + strand at 951.090 kb on + strand at 951.090 kb on + strand at 951.093 kb on + strand at 951.093 kb on + strand at 951.093 kb on + strand at 951.093 kb on + strand at 951.094 kb on - strand at 951.094 kb on - strand at 951.147 kb on + strand at 951.184 kb on + strand at 951.185 kb on - strand at 951.409 kb on + strand, within ABZR86_RS04230 at 951.475 kb on + strand, within ABZR86_RS04230 at 951.475 kb on + strand, within ABZR86_RS04230 at 951.476 kb on - strand, within ABZR86_RS04230 at 951.498 kb on + strand, within ABZR86_RS04230 at 951.499 kb on - strand, within ABZR86_RS04230 at 951.499 kb on - strand, within ABZR86_RS04230 at 951.499 kb on - strand, within ABZR86_RS04230 at 951.504 kb on + strand, within ABZR86_RS04230 at 951.505 kb on - strand, within ABZR86_RS04230 at 951.515 kb on + strand, within ABZR86_RS04230 at 951.516 kb on - strand, within ABZR86_RS04230 at 951.516 kb on - strand, within ABZR86_RS04230 at 951.516 kb on - strand, within ABZR86_RS04230 at 951.516 kb on - strand, within ABZR86_RS04230
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 949,721 + ABZR86_RS04220 0.83 +0.1 949,721 + ABZR86_RS04220 0.83 -0.2 949,722 - ABZR86_RS04220 0.83 -1.1 949,723 + ABZR86_RS04220 0.83 -1.2 949,723 + ABZR86_RS04220 0.83 -0.6 949,724 - ABZR86_RS04220 0.83 -0.6 949,724 - ABZR86_RS04220 0.83 -0.2 949,724 - ABZR86_RS04220 0.83 -0.1 949,724 - ABZR86_RS04220 0.83 -1.7 949,724 - ABZR86_RS04220 0.83 -0.0 949,732 + ABZR86_RS04220 0.83 +0.2 949,732 + ABZR86_RS04220 0.83 -0.0 949,733 - ABZR86_RS04220 0.83 +0.4 949,733 - ABZR86_RS04220 0.83 +0.6 949,733 - ABZR86_RS04220 0.83 -0.2 949,831 + ABZR86_RS04220 0.86 -0.3 949,831 + ABZR86_RS04220 0.86 -1.8 949,912 + ABZR86_RS04220 0.89 -1.3 949,912 + ABZR86_RS04220 0.89 +0.1 949,913 - ABZR86_RS04220 0.89 -0.1 949,913 - ABZR86_RS04220 0.89 -0.4 949,913 - ABZR86_RS04220 0.89 -0.3 949,913 - ABZR86_RS04220 0.89 -0.5 949,913 - ABZR86_RS04220 0.89 -1.1 949,913 - ABZR86_RS04220 0.89 +0.4 949,933 + ABZR86_RS04220 0.89 -0.0 949,934 - ABZR86_RS04220 0.90 +0.1 949,955 - +0.6 949,955 - -1.1 949,955 - +0.2 949,955 - +0.2 950,019 + +0.1 950,019 + +0.1 950,019 + +0.2 950,020 - -1.1 950,020 - +0.4 950,020 - -0.3 950,020 - +0.6 950,021 + +0.8 950,021 + -0.6 950,030 + -0.5 950,031 - +0.4 950,101 + -0.3 950,227 + +0.5 950,227 + -0.3 950,227 + -2.1 950,228 - +0.1 950,349 + -0.0 950,395 + ABZR86_RS04225 0.21 +0.3 950,395 + ABZR86_RS04225 0.21 +0.4 950,395 + ABZR86_RS04225 0.21 +0.0 950,396 - ABZR86_RS04225 0.22 +0.4 950,407 + ABZR86_RS04225 0.27 +0.4 950,407 + ABZR86_RS04225 0.27 -0.6 950,408 - ABZR86_RS04225 0.27 -1.4 950,418 + ABZR86_RS04225 0.32 -0.7 950,418 + ABZR86_RS04225 0.32 -0.6 950,418 + ABZR86_RS04225 0.32 +0.4 950,418 + ABZR86_RS04225 0.32 -0.1 950,418 + ABZR86_RS04225 0.32 +0.8 950,418 + ABZR86_RS04225 0.32 +0.6 950,418 + ABZR86_RS04225 0.32 +1.1 950,418 + ABZR86_RS04225 0.32 +0.4 950,419 - ABZR86_RS04225 0.32 +0.9 950,419 - ABZR86_RS04225 0.32 +1.3 950,419 - ABZR86_RS04225 0.32 -0.1 950,419 - ABZR86_RS04225 0.32 -0.4 950,419 - ABZR86_RS04225 0.32 -0.7 950,419 - ABZR86_RS04225 0.32 +0.3 950,419 - ABZR86_RS04225 0.32 -0.2 950,617 + -0.8 950,617 + -0.3 950,719 - -0.0 950,740 + -0.2 950,741 - -1.0 950,743 + +0.1 950,743 + +1.4 950,743 + -0.0 950,743 + -0.5 950,743 + -1.3 950,744 - -0.9 950,744 - -0.9 950,744 - -0.4 950,765 + +0.2 950,765 + +0.6 950,766 - -0.3 950,826 + +0.5 950,826 + -0.9 950,826 + -0.5 950,826 + -0.6 950,827 - +0.3 950,878 + -0.4 950,911 - +0.6 950,911 - -0.1 950,962 + +0.8 950,963 - -0.2 951,090 + +0.7 951,090 + +0.2 951,090 + -0.4 951,090 + +0.0 951,093 + +0.8 951,093 + -0.3 951,093 + -1.6 951,093 + +0.1 951,094 - -1.3 951,094 - +0.2 951,147 + +0.8 951,184 + -0.7 951,185 - -1.2 951,409 + ABZR86_RS04230 0.22 -0.1 951,475 + ABZR86_RS04230 0.26 -2.3 951,475 + ABZR86_RS04230 0.26 -0.8 951,476 - ABZR86_RS04230 0.26 +0.5 951,498 + ABZR86_RS04230 0.28 +0.5 951,499 - ABZR86_RS04230 0.28 -0.1 951,499 - ABZR86_RS04230 0.28 +1.4 951,499 - ABZR86_RS04230 0.28 +0.2 951,504 + ABZR86_RS04230 0.28 -0.1 951,505 - ABZR86_RS04230 0.28 -0.1 951,515 + ABZR86_RS04230 0.29 -0.9 951,516 - ABZR86_RS04230 0.29 +0.5 951,516 - ABZR86_RS04230 0.29 +0.4 951,516 - ABZR86_RS04230 0.29 +0.0 951,516 - ABZR86_RS04230 0.29 +0.5
Or see this region's nucleotide sequence