Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS02985

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS02980 and ABZR86_RS02985 overlap by 14 nucleotidesABZR86_RS02985 and ABZR86_RS02990 are separated by 27 nucleotides ABZR86_RS02980: ABZR86_RS02980 - DUF3182 family protein, at 609,594 to 610,724 _RS02980 ABZR86_RS02985: ABZR86_RS02985 - alpha/beta fold hydrolase, at 610,711 to 611,526 _RS02985 ABZR86_RS02990: ABZR86_RS02990 - enterotoxin A family protein, at 611,554 to 612,549 _RS02990 Position (kb) 610 611 612Strain fitness (log2 ratio) -2 -1 0 1 2at 609.732 kb on + strand, within ABZR86_RS02980at 609.732 kb on + strand, within ABZR86_RS02980at 609.732 kb on + strand, within ABZR86_RS02980at 609.732 kb on + strand, within ABZR86_RS02980at 609.732 kb on + strand, within ABZR86_RS02980at 609.733 kb on - strand, within ABZR86_RS02980at 609.733 kb on - strand, within ABZR86_RS02980at 609.733 kb on - strand, within ABZR86_RS02980at 609.733 kb on - strand, within ABZR86_RS02980at 609.733 kb on - strand, within ABZR86_RS02980at 609.780 kb on + strand, within ABZR86_RS02980at 609.780 kb on + strand, within ABZR86_RS02980at 609.780 kb on + strand, within ABZR86_RS02980at 609.988 kb on - strand, within ABZR86_RS02980at 610.055 kb on + strand, within ABZR86_RS02980at 610.055 kb on + strand, within ABZR86_RS02980at 610.056 kb on - strand, within ABZR86_RS02980at 610.245 kb on + strand, within ABZR86_RS02980at 610.245 kb on + strand, within ABZR86_RS02980at 610.245 kb on + strand, within ABZR86_RS02980at 610.245 kb on + strand, within ABZR86_RS02980at 610.245 kb on + strand, within ABZR86_RS02980at 610.245 kb on + strand, within ABZR86_RS02980at 610.245 kb on + strand, within ABZR86_RS02980at 610.246 kb on - strand, within ABZR86_RS02980at 610.246 kb on - strand, within ABZR86_RS02980at 610.285 kb on + strand, within ABZR86_RS02980at 610.286 kb on - strand, within ABZR86_RS02980at 610.294 kb on - strand, within ABZR86_RS02980at 610.427 kb on + strand, within ABZR86_RS02980at 610.427 kb on + strand, within ABZR86_RS02980at 610.427 kb on + strand, within ABZR86_RS02980at 610.428 kb on - strand, within ABZR86_RS02980at 610.428 kb on - strand, within ABZR86_RS02980at 610.431 kb on + strand, within ABZR86_RS02980at 610.432 kb on - strand, within ABZR86_RS02980at 610.432 kb on - strand, within ABZR86_RS02980at 610.449 kb on + strand, within ABZR86_RS02980at 610.450 kb on - strand, within ABZR86_RS02980at 610.450 kb on - strand, within ABZR86_RS02980at 610.611 kb on + strand, within ABZR86_RS02980at 610.612 kb on - strandat 610.692 kb on + strandat 610.692 kb on + strandat 610.693 kb on - strandat 610.693 kb on - strandat 610.693 kb on - strandat 610.880 kb on + strand, within ABZR86_RS02985at 611.113 kb on + strand, within ABZR86_RS02985at 611.302 kb on + strand, within ABZR86_RS02985at 611.338 kb on + strand, within ABZR86_RS02985at 611.339 kb on - strand, within ABZR86_RS02985at 611.558 kb on - strandat 611.558 kb on - strandat 611.558 kb on - strandat 611.879 kb on + strand, within ABZR86_RS02990at 611.879 kb on + strand, within ABZR86_RS02990at 611.879 kb on + strand, within ABZR86_RS02990at 611.915 kb on + strand, within ABZR86_RS02990at 611.915 kb on + strand, within ABZR86_RS02990at 611.915 kb on + strand, within ABZR86_RS02990at 611.916 kb on - strand, within ABZR86_RS02990at 611.984 kb on - strand, within ABZR86_RS02990at 612.195 kb on + strand, within ABZR86_RS02990at 612.203 kb on + strand, within ABZR86_RS02990at 612.231 kb on - strand, within ABZR86_RS02990at 612.236 kb on + strand, within ABZR86_RS02990at 612.236 kb on + strand, within ABZR86_RS02990at 612.236 kb on + strand, within ABZR86_RS02990at 612.236 kb on + strand, within ABZR86_RS02990at 612.237 kb on - strand, within ABZR86_RS02990at 612.237 kb on - strand, within ABZR86_RS02990at 612.239 kb on - strand, within ABZR86_RS02990at 612.356 kb on - strand, within ABZR86_RS02990at 612.371 kb on + strand, within ABZR86_RS02990at 612.371 kb on + strand, within ABZR86_RS02990at 612.525 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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609,732 + ABZR86_RS02980 0.12 +0.4
609,732 + ABZR86_RS02980 0.12 -0.3
609,732 + ABZR86_RS02980 0.12 +1.1
609,732 + ABZR86_RS02980 0.12 +0.3
609,732 + ABZR86_RS02980 0.12 -0.3
609,733 - ABZR86_RS02980 0.12 -0.7
609,733 - ABZR86_RS02980 0.12 -1.4
609,733 - ABZR86_RS02980 0.12 +0.3
609,733 - ABZR86_RS02980 0.12 -0.2
609,733 - ABZR86_RS02980 0.12 -0.7
609,780 + ABZR86_RS02980 0.16 +0.3
609,780 + ABZR86_RS02980 0.16 +1.3
609,780 + ABZR86_RS02980 0.16 +0.3
609,988 - ABZR86_RS02980 0.35 +0.6
610,055 + ABZR86_RS02980 0.41 -1.2
610,055 + ABZR86_RS02980 0.41 -0.6
610,056 - ABZR86_RS02980 0.41 -0.2
610,245 + ABZR86_RS02980 0.58 +0.6
610,245 + ABZR86_RS02980 0.58 -0.9
610,245 + ABZR86_RS02980 0.58 +2.3
610,245 + ABZR86_RS02980 0.58 -0.1
610,245 + ABZR86_RS02980 0.58 +0.5
610,245 + ABZR86_RS02980 0.58 +0.8
610,245 + ABZR86_RS02980 0.58 -0.3
610,246 - ABZR86_RS02980 0.58 +0.5
610,246 - ABZR86_RS02980 0.58 +0.1
610,285 + ABZR86_RS02980 0.61 +0.7
610,286 - ABZR86_RS02980 0.61 -0.3
610,294 - ABZR86_RS02980 0.62 +0.3
610,427 + ABZR86_RS02980 0.74 -0.1
610,427 + ABZR86_RS02980 0.74 +1.0
610,427 + ABZR86_RS02980 0.74 -0.1
610,428 - ABZR86_RS02980 0.74 -1.1
610,428 - ABZR86_RS02980 0.74 +0.1
610,431 + ABZR86_RS02980 0.74 -0.2
610,432 - ABZR86_RS02980 0.74 +0.8
610,432 - ABZR86_RS02980 0.74 +0.3
610,449 + ABZR86_RS02980 0.76 -0.6
610,450 - ABZR86_RS02980 0.76 -0.3
610,450 - ABZR86_RS02980 0.76 +0.7
610,611 + ABZR86_RS02980 0.90 -0.6
610,612 - -0.3
610,692 + -0.5
610,692 + -0.2
610,693 - +0.0
610,693 - -0.4
610,693 - +0.5
610,880 + ABZR86_RS02985 0.21 -0.2
611,113 + ABZR86_RS02985 0.49 -1.8
611,302 + ABZR86_RS02985 0.72 -0.0
611,338 + ABZR86_RS02985 0.77 +0.1
611,339 - ABZR86_RS02985 0.77 +0.4
611,558 - -0.3
611,558 - -0.3
611,558 - +0.2
611,879 + ABZR86_RS02990 0.33 -0.1
611,879 + ABZR86_RS02990 0.33 +0.7
611,879 + ABZR86_RS02990 0.33 -0.0
611,915 + ABZR86_RS02990 0.36 +0.1
611,915 + ABZR86_RS02990 0.36 -0.2
611,915 + ABZR86_RS02990 0.36 +0.6
611,916 - ABZR86_RS02990 0.36 -0.5
611,984 - ABZR86_RS02990 0.43 +0.2
612,195 + ABZR86_RS02990 0.64 +0.3
612,203 + ABZR86_RS02990 0.65 -0.4
612,231 - ABZR86_RS02990 0.68 -0.3
612,236 + ABZR86_RS02990 0.68 -0.1
612,236 + ABZR86_RS02990 0.68 -0.1
612,236 + ABZR86_RS02990 0.68 +0.2
612,236 + ABZR86_RS02990 0.68 -0.4
612,237 - ABZR86_RS02990 0.69 +0.3
612,237 - ABZR86_RS02990 0.69 -0.4
612,239 - ABZR86_RS02990 0.69 -0.8
612,356 - ABZR86_RS02990 0.81 +0.1
612,371 + ABZR86_RS02990 0.82 +0.3
612,371 + ABZR86_RS02990 0.82 -0.2
612,525 - +0.7

Or see this region's nucleotide sequence