Strain Fitness in Sinorhizobium meliloti 1021 around SMc04242

Experiment: Paraquat dichloride 0.3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.3 mg/ml
2,066,345	+		SMc04240	0.68	-0.3
2,066,345	+		SMc04240	0.68	-0.6
2,066,345	+		SMc04240	0.68	-0.7
2,066,345	+		SMc04240	0.68	-0.1
2,066,346	-		SMc04240	0.68	-1.1
2,066,346	-		SMc04240	0.68	+0.0
2,066,346	-		SMc04240	0.68	-1.6
2,066,346	-		SMc04240	0.68	+0.5
2,066,346	-		SMc04240	0.68	+0.7
2,066,346	-		SMc04240	0.68	-0.4
2,066,346	-		SMc04240	0.68	-0.6
2,066,347	-		SMc04240	0.68	+0.1
2,066,460	+		SMc04240	0.85	+0.1
2,066,460	+		SMc04240	0.85	+0.3
2,066,461	-		SMc04240	0.85	-0.1
2,066,626	+				-0.3
2,066,627	-				+0.3
2,066,634	-				-0.5
2,066,671	+		SMc04241	0.10	-0.7
2,066,671	+		SMc04241	0.10	-1.4
2,066,671	+		SMc04241	0.10	-0.3
2,066,671	+		SMc04241	0.10	-1.9
2,066,671	+		SMc04241	0.10	+1.9
2,066,694	+		SMc04241	0.15	-1.0
2,066,695	-		SMc04241	0.15	+0.6
2,066,841	+		SMc04241	0.42	+0.7
2,066,842	-		SMc04241	0.42	+0.3
2,066,842	-		SMc04241	0.42	-0.6
2,066,842	-		SMc04241	0.42	+0.2
2,066,931	-		SMc04241	0.59	-0.6
2,067,097	+				-0.5
2,067,097	+				+0.2
2,067,097	+				+0.6
2,067,098	-				-1.9
2,067,098	-				+2.7
2,067,098	-				+1.3
2,067,098	-				-1.7
2,067,119	-				-0.5
2,067,133	-				+0.8
2,067,473	+				+1.1
2,067,473	+		SMc04242	0.80	-1.0
2,067,474	-		SMc04242	0.80	-0.9
2,067,474	-		SMc04242	0.80	-0.8
2,067,547	-				-0.7
2,067,575	+				+0.2
2,067,650	+		SMc04243	0.12	+0.2
2,067,784	-		SMc04243	0.28	-1.5
2,067,945	+		SMc04243	0.47	+0.6
2,067,945	+		SMc04243	0.47	-1.2
2,067,949	+		SMc04243	0.48	+0.5
2,067,950	-		SMc04243	0.48	-0.4
2,067,950	-		SMc04243	0.48	-0.4
2,067,950	-		SMc04243	0.48	+1.3
2,067,950	-		SMc04243	0.48	+0.1
2,067,950	-		SMc04243	0.48	-0.2
2,068,194	-		SMc04243	0.78	-0.5
2,068,203	+		SMc04243	0.79	+0.1
2,068,204	-		SMc04243	0.79	-0.1
2,068,204	-		SMc04243	0.79	-0.3
2,068,280	-		SMc04243	0.88	-1.3
2,068,400	+				-0.9
2,068,505	+		SMc04244	0.15	+0.2