Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03025 and SMc03026 overlap by 4 nucleotides SMc03026 and SMc03027 are separated by 307 nucleotides SMc03027 and SMc03028 are separated by 6 nucleotides
SMc03025: SMc03025 - flagellum-specific ATP synthase, at 722,679 to 724,082
SMc03025
SMc03026: SMc03026 - hypothetical protein, at 724,079 to 724,630
SMc03026
SMc03027: SMc03027 - flagellar basal body rod protein FlgB, at 724,938 to 725,318
SMc03027
SMc03028: SMc03028 - flagellar basal body rod protein FlgC, at 725,325 to 725,744
SMc03028
Position (kb) 724
725 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 723.169 kb on + strand, within SMc03025 at 723.767 kb on - strand, within SMc03025 at 723.934 kb on + strand, within SMc03025 at 723.935 kb on - strand, within SMc03025 at 723.955 kb on - strand at 724.158 kb on + strand, within SMc03026 at 724.158 kb on + strand, within SMc03026 at 724.159 kb on - strand, within SMc03026 at 724.159 kb on - strand at 724.211 kb on + strand, within SMc03026 at 724.212 kb on - strand, within SMc03026 at 724.217 kb on + strand, within SMc03026 at 724.218 kb on - strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.516 kb on + strand, within SMc03026 at 724.517 kb on - strand, within SMc03026 at 724.517 kb on - strand, within SMc03026 at 724.526 kb on - strand, within SMc03026 at 724.828 kb on - strand at 724.863 kb on + strand at 724.863 kb on + strand at 724.864 kb on - strand at 724.864 kb on - strand at 724.909 kb on - strand at 725.202 kb on - strand, within SMc03027 at 725.202 kb on - strand, within SMc03027 at 725.253 kb on + strand, within SMc03027 at 725.316 kb on + strand at 725.317 kb on - strand at 725.317 kb on - strand at 725.349 kb on - strand at 725.621 kb on + strand, within SMc03028
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.3 mg/ml remove 723,169 + SMc03025 0.35 +0.9 723,767 - SMc03025 0.77 -0.3 723,934 + SMc03025 0.89 +0.5 723,935 - SMc03025 0.89 -1.1 723,955 - -0.0 724,158 + SMc03026 0.14 -2.5 724,158 + SMc03026 0.14 -0.3 724,159 - SMc03026 0.14 -0.2 724,159 - +0.9 724,211 + SMc03026 0.24 -0.3 724,212 - SMc03026 0.24 +0.2 724,217 + SMc03026 0.25 +0.1 724,218 - SMc03026 0.25 -0.9 724,514 + SMc03026 0.79 -2.1 724,514 + SMc03026 0.79 -1.4 724,514 + SMc03026 0.79 -0.3 724,514 + SMc03026 0.79 -2.2 724,514 + SMc03026 0.79 -0.5 724,514 + SMc03026 0.79 -0.2 724,514 + SMc03026 0.79 -1.5 724,514 + SMc03026 0.79 -0.9 724,514 + SMc03026 0.79 +1.2 724,515 - SMc03026 0.79 -0.8 724,515 - SMc03026 0.79 -2.0 724,515 - SMc03026 0.79 +0.5 724,515 - SMc03026 0.79 +0.0 724,515 - SMc03026 0.79 +0.0 724,515 - SMc03026 0.79 -0.8 724,516 + SMc03026 0.79 -0.4 724,517 - SMc03026 0.79 -0.2 724,517 - SMc03026 0.79 +0.8 724,526 - SMc03026 0.81 +0.5 724,828 - -2.5 724,863 + -0.4 724,863 + +0.8 724,864 - -1.6 724,864 - -0.6 724,909 - +0.6 725,202 - SMc03027 0.69 -1.1 725,202 - SMc03027 0.69 +0.0 725,253 + SMc03027 0.83 -0.0 725,316 + -0.9 725,317 - -3.1 725,317 - -0.2 725,349 - +0.0 725,621 + SMc03028 0.70 -2.1
Or see this region's nucleotide sequence