Strain Fitness in Sinorhizobium meliloti 1021 around SMc02108
Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.3 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,602,346 | - | -1.1 | |||
1,602,384 | + | +1.1 | |||
1,602,415 | - | +1.3 | |||
1,602,490 | + | -2.5 | |||
1,602,508 | + | SMc02108 | 0.12 | -0.7 | |
1,602,508 | + | SMc02108 | 0.12 | -0.9 | |
1,602,973 | - | SMc02108 | 0.74 | +0.1 | |
1,603,017 | + | SMc02108 | 0.80 | -0.5 | |
1,603,059 | + | SMc02108 | 0.86 | -3.1 | |
1,603,190 | + | -0.3 | |||
1,603,191 | - | -2.2 | |||
1,603,343 | - | SMc02107 | 0.51 | +0.4 | |
1,603,514 | - | -0.6 | |||
1,603,525 | - | +0.1 | |||
1,603,558 | + | -0.6 | |||
1,603,634 | + | +0.1 | |||
1,603,762 | + | -0.6 | |||
1,603,801 | - | -0.3 | |||
1,603,801 | - | +0.6 | |||
1,603,801 | - | +0.3 | |||
1,604,142 | + | -1.0 | |||
1,604,143 | - | +0.1 | |||
1,604,143 | - | +0.3 | |||
1,604,157 | - | -1.2 |
Or see this region's nucleotide sequence