Strain Fitness in Sinorhizobium meliloti 1021 around SMc02102
Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.3 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,606,125 | - | -2.3 | |||
1,606,503 | - | SMc02103 | 0.77 | -0.3 | |
1,606,527 | - | SMc02103 | 0.82 | -0.0 | |
1,606,527 | - | SMc02103 | 0.82 | +0.4 | |
1,606,536 | - | SMc02103 | 0.84 | +0.3 | |
1,606,536 | - | SMc02103 | 0.84 | +0.9 | |
1,606,909 | + | SMc02102 | 0.19 | -3.9 | |
1,606,909 | + | SMc02102 | 0.19 | -2.9 | |
1,606,924 | + | SMc02102 | 0.21 | -2.7 | |
1,606,954 | + | SMc02102 | 0.25 | -1.0 | |
1,606,955 | - | SMc02102 | 0.25 | -1.4 | |
1,606,955 | - | SMc02102 | 0.25 | +1.5 | |
1,607,033 | - | SMc02102 | 0.34 | -2.7 | |
1,607,386 | + | SMc02102 | 0.77 | -1.2 | |
1,607,386 | + | SMc02102 | 0.77 | -1.2 | |
1,607,569 | + | +0.1 | |||
1,607,569 | + | -1.6 | |||
1,607,570 | - | +0.2 | |||
1,607,570 | - | -2.2 | |||
1,607,570 | - | -0.8 | |||
1,607,570 | - | +0.2 |
Or see this region's nucleotide sequence