Strain Fitness in Sinorhizobium meliloti 1021 around SMc02077
Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.3 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,637,190 | + | +0.5 | |||
1,637,246 | + | +1.5 | |||
1,638,152 | - | -0.4 | |||
1,638,205 | + | +0.3 | |||
1,638,452 | + | SMc02077 | 0.35 | +0.3 | |
1,638,452 | + | SMc02077 | 0.35 | -2.2 | |
1,638,641 | + | SMc02077 | 0.59 | -1.4 | |
1,638,642 | - | SMc02077 | 0.59 | -2.2 | |
1,638,642 | - | SMc02077 | 0.59 | -0.7 | |
1,639,124 | + | -0.1 | |||
1,639,125 | - | +2.1 | |||
1,639,158 | + | -0.0 | |||
1,639,161 | - | -0.3 | |||
1,639,192 | + | +0.1 | |||
1,639,193 | - | +0.0 | |||
1,639,568 | - | SMc02076 | 0.27 | -0.8 | |
1,639,568 | - | SMc02076 | 0.27 | -0.1 | |
1,639,626 | + | SMc02076 | 0.31 | -0.2 | |
1,639,626 | + | SMc02076 | 0.31 | +0.9 | |
1,639,756 | + | SMc02076 | 0.40 | +0.4 | |
1,639,756 | + | SMc02076 | 0.40 | +0.1 | |
1,639,757 | - | SMc02076 | 0.40 | -0.4 | |
1,639,800 | + | SMc02076 | 0.43 | +0.6 | |
1,639,801 | - | SMc02076 | 0.43 | +0.2 | |
1,639,826 | - | SMc02076 | 0.45 | -2.3 |
Or see this region's nucleotide sequence