Strain Fitness in Sinorhizobium meliloti 1021 around SMc02051
Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.3 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,666,204 | + | +1.4 | |||
1,666,205 | - | -0.9 | |||
1,666,391 | + | SMc02052 | 0.74 | -0.4 | |
1,666,487 | - | +0.3 | |||
1,666,488 | + | +1.8 | |||
1,666,489 | - | +0.1 | |||
1,666,489 | - | -0.7 | |||
1,666,489 | - | +0.2 | |||
1,666,498 | + | -2.0 | |||
1,666,522 | - | -0.3 | |||
1,666,534 | + | -0.1 | |||
1,666,736 | + | +1.1 | |||
1,666,736 | + | +1.7 | |||
1,666,736 | + | -2.3 | |||
1,666,737 | - | -0.2 | |||
1,666,737 | - | -0.1 | |||
1,666,760 | + | SMc02051 | 0.17 | -1.3 | |
1,666,842 | - | SMc02051 | 0.74 | -0.6 | |
1,666,885 | - | +1.0 | |||
1,666,894 | + | -0.4 | |||
1,666,894 | + | +1.3 | |||
1,666,895 | - | +1.1 | |||
1,666,895 | - | +0.0 | |||
1,666,895 | - | -0.6 | |||
1,666,915 | - | +0.1 | |||
1,666,938 | + | -0.7 | |||
1,666,938 | + | +0.7 | |||
1,666,939 | - | +0.4 | |||
1,666,972 | + | +0.2 | |||
1,666,972 | + | +0.1 | |||
1,666,980 | + | -3.1 | |||
1,666,980 | + | -0.6 | |||
1,666,981 | - | -1.3 | |||
1,666,981 | - | +0.7 | |||
1,667,108 | + | -1.2 | |||
1,667,156 | + | -0.3 | |||
1,667,157 | - | -0.6 | |||
1,667,431 | + | -0.7 | |||
1,667,431 | + | -0.9 | |||
1,667,432 | - | -0.6 | |||
1,667,490 | + | -0.2 |
Or see this region's nucleotide sequence