Strain Fitness in Sinorhizobium meliloti 1021 around SMc01540
Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.3 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,475,350 | - | -3.0 | |||
2,475,389 | + | -0.5 | |||
2,475,691 | + | -0.5 | |||
2,475,692 | - | -0.5 | |||
2,475,692 | - | -0.0 | |||
2,475,692 | - | -0.4 | |||
2,475,695 | - | +1.4 | |||
2,475,784 | - | +0.9 | |||
2,475,794 | + | -0.2 | |||
2,475,794 | + | -0.0 | |||
2,475,794 | + | -0.4 | |||
2,475,916 | + | +1.6 | |||
2,475,917 | - | -0.2 | |||
2,475,917 | - | +1.7 | |||
2,475,917 | - | -0.5 | |||
2,475,975 | + | +0.6 | |||
2,476,242 | + | -0.4 | |||
2,476,347 | + | SMc01540 | 0.48 | +0.9 | |
2,476,381 | + | SMc01540 | 0.63 | +0.6 | |
2,476,456 | + | +1.3 | |||
2,476,457 | - | +0.3 | |||
2,476,499 | + | -0.2 | |||
2,476,500 | - | +1.0 | |||
2,476,502 | - | +0.7 | |||
2,476,682 | - | +0.9 | |||
2,477,035 | + | SMc01541 | 0.37 | +0.9 | |
2,477,075 | + | SMc01541 | 0.40 | -0.2 | |
2,477,076 | - | SMc01541 | 0.40 | -0.0 | |
2,477,076 | - | SMc01541 | 0.40 | +0.5 | |
2,477,076 | - | SMc01541 | 0.40 | -1.8 | |
2,477,127 | + | SMc01541 | 0.45 | +0.7 | |
2,477,127 | + | SMc01541 | 0.45 | +1.8 | |
2,477,128 | - | SMc01541 | 0.45 | -0.8 | |
2,477,144 | + | SMc01541 | 0.46 | +0.4 | |
2,477,144 | + | SMc01541 | 0.46 | -0.1 | |
2,477,145 | - | SMc01541 | 0.46 | +0.6 | |
2,477,145 | - | SMc01541 | 0.46 | +0.2 |
Or see this region's nucleotide sequence