Strain Fitness in Sinorhizobium meliloti 1021 around SMc01508
Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.3 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,620,142 | + | SMc01510 | 0.61 | +0.2 | |
2,620,142 | + | SMc01510 | 0.61 | -0.2 | |
2,620,142 | + | SMc01510 | 0.61 | -1.2 | |
2,620,143 | - | SMc01510 | 0.61 | +0.2 | |
2,620,143 | - | SMc01510 | 0.61 | -0.1 | |
2,620,143 | - | SMc01510 | 0.61 | +0.0 | |
2,620,267 | + | SMc01510 | 0.77 | -0.2 | |
2,620,267 | + | SMc01510 | 0.77 | -0.0 | |
2,620,267 | + | SMc01510 | 0.77 | -0.1 | |
2,620,268 | - | SMc01510 | 0.77 | +1.2 | |
2,620,422 | + | -0.7 | |||
2,620,445 | + | +0.1 | |||
2,620,445 | + | -0.0 | |||
2,620,445 | + | -0.1 | |||
2,620,445 | + | -1.1 | |||
2,620,446 | - | -1.8 | |||
2,620,479 | - | -0.2 | |||
2,620,527 | - | -0.3 | |||
2,620,742 | + | SMc01509 | 0.24 | -1.2 | |
2,620,906 | + | SMc01509 | 0.69 | +0.4 | |
2,621,046 | - | -2.1 | |||
2,621,046 | - | -0.0 | |||
2,621,058 | + | +0.3 | |||
2,621,059 | - | -0.2 | |||
2,621,059 | - | +1.0 | |||
2,621,059 | - | +1.3 | |||
2,621,059 | - | -0.0 | |||
2,621,059 | - | +0.9 | |||
2,621,064 | - | +1.0 | |||
2,621,131 | - | SMc01508 | 0.16 | +1.0 | |
2,621,133 | - | SMc01508 | 0.16 | +1.8 | |
2,621,184 | + | SMc01508 | 0.28 | +1.1 | |
2,621,230 | - | SMc01508 | 0.38 | +0.4 | |
2,621,494 | - | +0.4 | |||
2,621,494 | - | +3.6 |
Or see this region's nucleotide sequence