Strain Fitness in Sinorhizobium meliloti 1021 around SMc01461

Experiment: Paraquat dichloride 0.3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.3 mg/ml
2,306,105	+		SMc01459	0.77	+0.2
2,306,105	+		SMc01459	0.77	+0.7
2,306,106	-		SMc01459	0.77	-0.1
2,306,151	+		SMc01459	0.82	-0.5
2,306,415	+		SMc01460	0.25	-0.1
2,306,415	+		SMc01460	0.25	-1.6
2,306,415	+		SMc01460	0.25	+0.3
2,306,415	+		SMc01460	0.25	-2.5
2,306,415	+		SMc01460	0.25	-2.8
2,306,415	+		SMc01460	0.25	-1.0
2,306,416	-		SMc01460	0.25	+0.3
2,306,416	-		SMc01460	0.25	-1.0
2,306,416	-		SMc01460	0.25	-0.1
2,306,416	-		SMc01460	0.25	-1.6
2,306,527	+		SMc01460	0.52	-0.2
2,306,529	+		SMc01460	0.52	+0.5
2,306,530	-		SMc01460	0.53	-2.0
2,306,560	+		SMc01460	0.60	+0.6
2,306,560	+		SMc01460	0.60	-0.0
2,306,722	+				-0.5
2,306,722	+				+2.1
2,306,723	-				+0.1
2,306,976	+				-0.9
2,306,976	+				-1.4
2,307,490	-		SMc01461	0.25	-0.8
2,307,598	-		SMc01461	0.29	-1.2
2,307,657	+		SMc01461	0.31	-3.4
2,307,658	-		SMc01461	0.31	-0.4
2,307,660	-		SMc01461	0.31	-0.9
2,308,166	-		SMc01461	0.51	-2.4
2,308,166	-		SMc01461	0.51	-1.8
2,308,402	-		SMc01461	0.60	-1.0
2,308,584	+		SMc01461	0.67	-0.9
2,308,737	-		SMc01461	0.73	-2.6
2,308,890	+		SMc01461	0.79	-3.8
2,308,926	-		SMc01461	0.81	-2.0
2,309,040	+		SMc01461	0.85	-0.2
2,309,041	-		SMc01461	0.85	-1.2
2,309,041	-		SMc01461	0.85	-0.8
2,309,049	+		SMc01461	0.85	-0.6
2,309,110	-		SMc01461	0.88	+1.1
2,309,410	+				-2.4
2,309,411	-				+1.1
2,309,411	-				-0.2
2,309,460	+				-0.3
2,309,460	+				-0.4
2,309,461	-				-0.3
2,309,493	+				-0.6
2,309,494	-				+0.1
2,309,494	-				-2.6
2,309,494	-				-1.1
2,309,494	-				+1.0
2,309,525	+		SMc01462	0.11	+0.3
2,309,567	+		SMc01462	0.20	-1.4
2,309,567	+		SMc01462	0.20	+0.0
2,309,567	+		SMc01462	0.20	+0.4
2,309,568	-		SMc01462	0.21	+1.9
2,309,603	+		SMc01462	0.28	-0.4
2,309,603	+		SMc01462	0.28	-2.4
2,309,675	+		SMc01462	0.44	-0.9
2,309,676	-		SMc01462	0.44	-0.0
2,309,777	+		SMc01462	0.66	+0.8
2,309,778	-		SMc01462	0.66	-2.4
2,309,862	-		SMc01462	0.84	-0.4
2,309,862	-		SMc01462	0.84	+0.1
2,309,891	+				+0.9
2,309,891	+				-1.4
2,309,892	-				-0.0
2,309,966	+				+0.2
2,309,966	+				-0.7
2,309,966	+				-2.8
2,309,973	-				-0.6
2,310,059	+		SMc01463	0.12	+0.1
2,310,060	-		SMc01463	0.13	-0.5
2,310,060	-		SMc01463	0.13	-0.9
2,310,062	+		SMc01463	0.13	+0.2
2,310,063	-		SMc01463	0.13	-1.4
2,310,063	-		SMc01463	0.13	-0.7
2,310,172	+		SMc01463	0.28	-1.9
2,310,173	-		SMc01463	0.28	-0.2
2,310,357	-		SMc01463	0.54	+0.6
2,310,357	-		SMc01463	0.54	+0.4
2,310,357	-		SMc01463	0.54	-0.5
2,310,357	-		SMc01463	0.54	+0.2
2,310,378	+		SMc01463	0.57	-1.3