Strain Fitness in Sinorhizobium meliloti 1021 around SMc01175

Experiment: Paraquat dichloride 0.3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.3 mg/ml
1,753,723	+				+0.5
1,753,724	-				+1.1
1,753,844	+		SMc01177	0.33	+0.1
1,753,863	-		SMc01177	0.37	-0.0
1,753,947	+		SMc01177	0.58	-0.0
1,753,947	+				+1.7
1,753,948	-		SMc01177	0.59	-0.2
1,753,948	-		SMc01177	0.59	+1.9
1,753,950	-		SMc01177	0.59	-1.0
1,754,000	+		SMc01177	0.72	-0.8
1,754,001	-		SMc01177	0.72	+1.1
1,754,061	+		SMc01177	0.87	+0.9
1,754,079	-				+1.5
1,754,147	+		SMc01176	0.16	+1.1
1,754,147	+		SMc01176	0.16	-0.7
1,754,230	+		SMc01176	0.50	+1.2
1,754,231	-		SMc01176	0.51	+0.8
1,754,231	-		SMc01176	0.51	-3.1
1,754,246	+		SMc01176	0.57	+1.0
1,754,360	+				-0.2
1,754,395	+				-0.9
1,754,396	-				+0.9
1,754,397	+				-0.2
1,754,398	-				+1.3
1,754,398	-				+0.1
1,754,398	-				-0.3
1,754,425	+				+0.8
1,754,425	+				-0.1
1,754,426	-				+2.1
1,754,545	+				+0.4
1,754,546	-				-0.1
1,754,646	-		SMc01175	0.12	+0.2
1,754,654	+		SMc01175	0.13	+0.2
1,754,664	+		SMc01175	0.14	-0.3
1,754,664	+		SMc01175	0.14	-0.1
1,754,664	+		SMc01175	0.14	-1.6
1,754,684	+		SMc01175	0.17	-0.9
1,754,685	-		SMc01175	0.17	-0.3
1,754,688	+		SMc01175	0.17	+1.0
1,754,688	+		SMc01175	0.17	+0.4
1,754,812	-		SMc01175	0.32	+0.8
1,754,812	-		SMc01175	0.32	+1.3
1,754,916	-		SMc01175	0.44	+0.9
1,754,943	-		SMc01175	0.47	+0.9
1,754,994	+		SMc01175	0.53	+2.0
1,754,995	-		SMc01175	0.53	-1.4
1,754,995	-		SMc01175	0.53	-1.5
1,755,143	+		SMc01175	0.71	-0.1
1,755,244	+		SMc01175	0.83	+0.6
1,755,244	+		SMc01175	0.83	-0.5
1,755,244	+		SMc01175	0.83	+0.0
1,755,245	-		SMc01175	0.83	-1.2
1,755,245	-		SMc01175	0.83	+0.3
1,755,379	+				-0.3
1,755,380	-				-0.5
1,755,380	-				-0.5
1,755,380	-				+0.3
1,755,435	+				+0.1
1,755,436	-				-3.2
1,755,450	+				-0.6
1,755,450	+				+0.0
1,755,450	+				-2.0
1,755,450	+				-1.5
1,755,450	+				+0.7
1,755,450	+				-1.9
1,755,451	-				-0.3
1,755,451	-				-1.2
1,755,452	+				+0.5
1,755,452	+				-0.6
1,755,453	-				-3.0
1,755,453	-				-0.3
1,755,554	+				+0.2
1,755,555	-				-0.7
1,755,555	-				-2.8
1,755,567	+				-0.5
1,755,596	+				+0.7
1,755,654	+				-0.9
1,755,655	-				+0.2
1,755,666	-				-0.3
1,755,704	+				+0.1
1,755,705	-				-0.1
1,755,705	-				-0.5
1,755,705	-				-1.4
1,755,915	-		SMc01174	0.23	-2.0
1,755,967	-		SMc01174	0.28	-1.2
1,756,066	-		SMc01174	0.37	-0.0
1,756,083	+		SMc01174	0.39	-0.3
1,756,083	+		SMc01174	0.39	+0.0
1,756,083	+		SMc01174	0.39	+2.4
1,756,084	-		SMc01174	0.39	-0.1
1,756,084	-		SMc01174	0.39	+0.7
1,756,084	-		SMc01174	0.39	+0.5
1,756,084	-		SMc01174	0.39	+0.8
1,756,353	+		SMc01174	0.64	+0.4
1,756,353	+		SMc01174	0.64	+0.3
1,756,354	-		SMc01174	0.64	+0.4