Strain Fitness in Sinorhizobium meliloti 1021 around SMc01052

Experiment: Paraquat dichloride 0.3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.3 mg/ml
1,581,582	+				-0.6
1,581,582	+				+0.6
1,581,582	+				+1.3
1,581,583	-				-0.5
1,581,583	-				-0.4
1,581,583	-				+0.3
1,581,583	-				-1.5
1,581,583	-				+0.2
1,581,587	+				+0.4
1,581,587	+				-2.1
1,581,587	+				+1.1
1,581,588	-				-3.2
1,581,588	-				-0.6
1,581,588	-				-0.0
1,581,614	-				-0.2
1,581,614	-				-0.0
1,581,614	-				-0.4
1,581,747	-		SMc01051	0.16	-1.3
1,581,860	+		SMc01051	0.30	+1.5
1,582,284	-		SMc01051	0.81	-0.1
1,582,284	-		SMc01051	0.81	+0.0
1,582,315	+		SMc01051	0.84	-1.5
1,582,315	+		SMc01051	0.84	+0.4
1,582,316	-		SMc01051	0.84	+1.5
1,582,316	-		SMc01051	0.84	-1.4
1,582,331	+		SMc01051	0.86	+0.6
1,582,332	-		SMc01051	0.86	+0.5
1,582,333	+		SMc01051	0.86	-0.6
1,582,333	+		SMc01051	0.86	-1.1
1,582,333	+		SMc01051	0.86	+1.1
1,582,461	+				+0.6
1,582,489	+				+0.5
1,582,490	-				+0.0
1,582,490	-				+0.1
1,582,493	+				-0.1
1,582,494	-				-1.1
1,582,494	-				-0.8
1,582,511	-		SMc01052	0.11	-2.0
1,582,717	+		SMc01052	0.46	-0.2
1,582,718	-		SMc01052	0.46	-0.5
1,582,718	-		SMc01052	0.46	-0.2
1,582,718	-		SMc01052	0.46	+1.1
1,582,720	+		SMc01052	0.46	+1.1
1,582,721	-		SMc01052	0.46	+0.2
1,582,828	+		SMc01052	0.64	+0.5
1,582,829	-		SMc01052	0.65	-2.8
1,582,829	-		SMc01052	0.65	+0.9
1,582,983	+				-1.1
1,582,984	-				-0.1
1,582,984	-				-0.4
1,583,066	+				-2.0
1,583,215	+				-0.2
1,583,216	-				-0.7
1,583,223	-				+1.0
1,583,259	+				+0.3
1,583,260	-				+1.4
1,583,260	-				+0.2
1,583,260	-				+0.0
1,583,355	-				-0.2
1,583,393	-				+0.5
1,583,593	+		SMc01053	0.23	-2.2
1,583,593	+		SMc01053	0.23	-0.5
1,583,594	-		SMc01053	0.23	-0.7
1,583,594	-		SMc01053	0.23	-0.1
1,583,594	-		SMc01053	0.23	-0.2
1,583,728	-		SMc01053	0.32	-1.4
1,583,844	-		SMc01053	0.40	-0.2
1,584,007	+		SMc01053	0.51	+0.3
1,584,007	+		SMc01053	0.51	+2.0
1,584,008	-		SMc01053	0.51	-0.2