Strain Fitness in Sinorhizobium meliloti 1021 around SMc00451
Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.3 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,006,925 | - | SMc00075 | 0.15 | -0.7 | |
1,006,925 | - | SMc00075 | 0.15 | +0.9 | |
1,006,937 | - | SMc00075 | 0.17 | -0.5 | |
1,007,042 | - | SMc00075 | 0.34 | +1.0 | |
1,007,069 | - | SMc00075 | 0.38 | +0.9 | |
1,007,069 | - | SMc00075 | 0.38 | +0.7 | |
1,007,073 | - | SMc00075 | 0.39 | -0.7 | |
1,007,381 | - | SMc00075 | 0.89 | -1.3 | |
1,007,450 | - | -2.3 | |||
1,007,450 | - | -0.9 | |||
1,007,450 | - | -1.1 | |||
1,007,669 | - | -0.3 | |||
1,007,737 | + | -1.2 | |||
1,007,770 | + | +0.3 | |||
1,007,771 | - | -0.3 | |||
1,008,254 | + | SMc00451 | 0.41 | -3.6 | |
1,008,254 | + | SMc00451 | 0.41 | -4.6 | |
1,008,255 | - | SMc00451 | 0.41 | -1.6 | |
1,008,477 | + | SMc00451 | 0.58 | -1.6 | |
1,008,478 | - | SMc00451 | 0.58 | -1.0 | |
1,008,478 | - | SMc00451 | 0.58 | -1.9 | |
1,008,480 | - | SMc00451 | 0.59 | -2.5 | |
1,008,480 | - | SMc00451 | 0.59 | -1.2 | |
1,008,576 | - | SMc00451 | 0.66 | -4.0 | |
1,008,755 | + | SMc00451 | 0.80 | -1.6 | |
1,008,758 | + | SMc00451 | 0.80 | -1.9 | |
1,008,758 | + | SMc00451 | 0.80 | -3.7 | |
1,008,758 | + | SMc00451 | 0.80 | -1.1 | |
1,008,759 | - | SMc00451 | 0.80 | -1.7 | |
1,009,054 | - | -0.7 |
Or see this region's nucleotide sequence