Strain Fitness in Sinorhizobium meliloti 1021 around SMc00165

Experiment: Paraquat dichloride 0.3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.3 mg/ml
1,998,981	+		SMc00166	0.23	+0.2
1,999,082	+		SMc00166	0.37	-3.4
1,999,562	+				-0.0
1,999,619	+				-1.0
1,999,619	+				-3.8
1,999,629	-				-0.9
1,999,762	-				-0.5
1,999,841	+				+0.5
1,999,842	-				-0.6
1,999,842	-				+0.7
1,999,842	-				+0.1
1,999,842	-				-2.2
1,999,913	+		SMc00165	0.13	-0.6
1,999,913	+		SMc00165	0.13	+0.1
2,000,096	+		SMc00165	0.35	-1.2
2,000,144	+		SMc00165	0.41	+0.1
2,000,144	+		SMc00165	0.41	-0.8
2,000,144	+		SMc00165	0.41	+0.4
2,000,145	-		SMc00165	0.41	+1.1
2,000,145	-		SMc00165	0.41	+0.8
2,000,145	-		SMc00165	0.41	-0.8
2,000,233	+		SMc00165	0.52	+0.5
2,000,233	+		SMc00165	0.52	+0.0
2,000,233	+		SMc00165	0.52	-0.3
2,000,234	-		SMc00165	0.52	+0.2
2,000,234	-		SMc00165	0.52	-1.5
2,000,432	-		SMc00165	0.76	-0.5
2,000,435	+		SMc00165	0.76	-0.4
2,000,435	+		SMc00165	0.76	-0.2
2,000,435	+		SMc00165	0.76	+0.0
2,000,435	+		SMc00165	0.76	-1.5
2,000,435	+		SMc00165	0.76	+0.1
2,000,435	+		SMc00165	0.76	-1.4
2,000,435	+		SMc00165	0.76	-0.1
2,000,436	-		SMc00165	0.77	-1.2
2,000,658	+				-1.0
2,000,712	-				+0.1
2,000,712	-				-1.3
2,000,955	-				+0.3
2,000,964	-				-0.2
2,000,987	+				-0.3
2,001,001	+				-2.4
2,001,007	-				-0.6
2,001,154	+		SMc00164	0.13	+0.1
2,001,154	+		SMc00164	0.13	-0.8
2,001,155	-		SMc00164	0.13	-0.6
2,001,300	+		SMc00164	0.25	+0.4
2,001,430	+		SMc00164	0.36	-0.9
2,001,463	+		SMc00164	0.39	-0.1
2,001,464	-				-0.2
2,001,475	+		SMc00164	0.40	-0.1
2,001,475	+		SMc00164	0.40	+0.5
2,001,475	+		SMc00164	0.40	+0.7
2,001,476	-		SMc00164	0.40	+1.2
2,001,476	-		SMc00164	0.40	-0.9
2,001,485	+		SMc00164	0.41	+1.3
2,001,485	+		SMc00164	0.41	+0.1
2,001,485	+		SMc00164	0.41	-0.1
2,001,485	+		SMc00164	0.41	+0.4
2,001,486	-		SMc00164	0.41	-0.5
2,001,597	+		SMc00164	0.50	+1.5
2,001,597	+		SMc00164	0.50	+0.1
2,001,597	+		SMc00164	0.50	+0.0
2,001,598	-		SMc00164	0.50	+0.2
2,001,598	-		SMc00164	0.50	-0.2
2,001,598	-		SMc00164	0.50	+0.4
2,001,628	+		SMc00164	0.53	-2.0