Strain Fitness in Sinorhizobium meliloti 1021 around SMc00143

Experiment: Paraquat dichloride 0.3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.3 mg/ml
2,025,681	-				+0.2
2,025,681	-				+1.4
2,025,681	-				-0.2
2,025,681	-				-1.1
2,025,740	+				-0.2
2,025,858	+		SMc00197	0.11	+0.2
2,025,858	+		SMc00197	0.11	-1.1
2,025,859	-		SMc00197	0.12	+0.2
2,025,859	-		SMc00197	0.12	-0.8
2,025,859	-		SMc00197	0.12	+0.1
2,025,912	-		SMc00197	0.17	+1.0
2,025,912	-		SMc00197	0.17	-0.8
2,025,912	-		SMc00197	0.17	+2.4
2,025,969	-		SMc00197	0.24	+0.7
2,026,009	+		SMc00197	0.28	-0.5
2,026,009	+		SMc00197	0.28	+1.1
2,026,009	+		SMc00197	0.28	+1.0
2,026,010	-		SMc00197	0.28	-0.3
2,026,010	-		SMc00197	0.28	+0.0
2,026,010	-		SMc00197	0.28	+0.8
2,026,012	-		SMc00197	0.28	+0.1
2,026,012	-		SMc00197	0.28	-0.7
2,026,012	-		SMc00197	0.28	-1.3
2,026,012	-		SMc00197	0.28	-2.9
2,026,012	-		SMc00197	0.28	+3.7
2,026,145	+		SMc00197	0.43	+0.0
2,026,145	+		SMc00197	0.43	-0.8
2,026,169	+		SMc00197	0.46	-0.8
2,026,169	+		SMc00197	0.46	-0.1
2,026,170	-		SMc00197	0.46	+0.2
2,026,288	+		SMc00197	0.59	-2.4
2,026,288	+		SMc00197	0.59	+1.0
2,026,288	+		SMc00197	0.59	-1.3
2,026,289	-		SMc00197	0.59	+0.1
2,026,289	-		SMc00197	0.59	+0.4
2,026,436	+		SMc00197	0.75	-1.0
2,026,437	-		SMc00197	0.75	+0.5
2,026,437	-		SMc00197	0.75	+1.4
2,026,483	+		SMc00197	0.80	-2.1
2,026,484	-		SMc00197	0.80	-0.3
2,026,588	+				-0.5
2,026,589	-				+0.5
2,026,590	+				+1.5
2,026,590	+				-0.6
2,026,591	-				-0.1
2,026,591	-				-0.2
2,026,591	-				-0.7
2,026,591	-				+0.8
2,026,597	+				-2.0
2,026,598	-				+0.0
2,026,660	+				-0.1
2,026,661	-				-0.8
2,026,953	+		SMc00143	0.42	-0.5
2,027,213	+		SMc00143	0.81	-1.5
2,027,214	-		SMc00143	0.82	-1.5
2,027,311	+				-0.3
2,027,439	+		SMc00142	0.21	+0.2
2,027,439	+		SMc00142	0.21	+0.6
2,027,440	-		SMc00142	0.21	+2.2
2,027,441	+		SMc00142	0.21	+0.2
2,027,441	+		SMc00142	0.21	+0.4
2,027,441	+		SMc00142	0.21	+0.2
2,027,442	-		SMc00142	0.21	+1.5
2,027,506	-		SMc00142	0.33	+0.4
2,027,506	-		SMc00142	0.33	-1.4
2,027,536	+		SMc00142	0.39	+1.8
2,027,642	-		SMc00142	0.59	-0.9
2,027,642	-		SMc00142	0.59	-0.2
2,027,656	-		SMc00142	0.62	-2.1
2,027,656	-		SMc00142	0.62	-1.1
2,027,739	-		SMc00142	0.78	-0.6
2,027,739	-		SMc00142	0.78	+0.1
2,027,789	-		SMc00142	0.87	+0.4
2,027,906	-				-0.7
2,027,906	-				+0.1
2,027,918	+				-0.1
2,027,972	-				-1.3
2,027,982	+				-0.4
2,027,983	-				+1.1
2,027,983	-				-0.8
2,028,113	-				+1.3
2,028,294	+		SMc00141	0.16	-0.5
2,028,294	+		SMc00141	0.16	-0.3
2,028,295	-		SMc00141	0.16	-0.5