Strain Fitness in Sinorhizobium meliloti 1021 around SMc00093

Experiment: Paraquat dichloride 0.3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.3 mg/ml
1,038,496	-		SMc00030	0.18	-1.1
1,038,553	+		SMc00030	0.33	+0.6
1,038,554	-		SMc00030	0.33	+0.0
1,038,777	+				-1.2
1,038,778	-				+1.2
1,038,786	+				-0.1
1,038,787	-				+0.6
1,038,881	+		SMc00031	0.14	-0.9
1,038,881	+		SMc00031	0.14	-0.0
1,038,882	-		SMc00031	0.15	-2.7
1,038,906	+		SMc00031	0.20	-0.3
1,038,907	-		SMc00031	0.20	-0.8
1,038,907	-		SMc00031	0.20	+0.1
1,038,907	-		SMc00031	0.20	-2.0
1,038,907	-		SMc00031	0.20	+1.3
1,039,002	-		SMc00031	0.40	+0.2
1,039,012	+		SMc00031	0.42	+1.1
1,039,012	+		SMc00031	0.42	-1.2
1,039,013	-		SMc00031	0.42	+0.4
1,039,029	+		SMc00031	0.45	-0.8
1,039,082	+		SMc00031	0.56	+0.0
1,039,083	-		SMc00031	0.56	+0.0
1,039,083	-		SMc00031	0.56	-0.5
1,039,290	-				+0.5
1,039,294	+				+2.1
1,039,370	+				+1.3
1,039,370	+				+1.0
1,039,423	+				+2.6
1,039,424	-				-0.8
1,039,552	+		SMc00093	0.16	+1.8
1,039,552	+		SMc00093	0.16	-0.2
1,039,553	-		SMc00093	0.16	+0.6
1,039,553	-		SMc00093	0.16	+1.7
1,039,640	-		SMc00093	0.21	+0.2
1,039,724	+		SMc00093	0.26	-0.1
1,039,725	-		SMc00093	0.26	+0.4
1,039,725	-		SMc00093	0.26	+0.9
1,039,725	-		SMc00093	0.26	+2.0
1,039,726	+		SMc00093	0.26	+1.9
1,039,726	+		SMc00093	0.26	+3.7
1,039,727	-		SMc00093	0.26	+0.2
1,039,855	+		SMc00093	0.34	+1.0
1,039,856	-		SMc00093	0.34	+1.9
1,039,856	-		SMc00093	0.34	-0.5
1,039,856	-		SMc00093	0.34	+0.1
1,039,882	+		SMc00093	0.36	-0.4
1,039,882	+		SMc00093	0.36	+1.3
1,040,023	+		SMc00093	0.44	+0.2
1,040,024	-		SMc00093	0.44	-0.2
1,040,112	+		SMc00093	0.50	+1.3
1,040,112	+		SMc00093	0.50	+1.7
1,040,347	+		SMc00093	0.64	+0.4
1,040,426	+		SMc00093	0.69	-1.8
1,040,426	+		SMc00093	0.69	+1.4
1,040,428	+		SMc00093	0.69	+0.0
1,040,429	-		SMc00093	0.69	+0.7
1,040,578	+		SMc00093	0.78	+0.3
1,040,578	+		SMc00093	0.78	+0.7
1,040,578	+		SMc00093	0.78	+0.6
1,040,579	-		SMc00093	0.78	+0.2
1,040,662	+		SMc00093	0.83	+0.5
1,040,662	+		SMc00093	0.83	+2.4
1,040,663	-				+1.7
1,040,663	-		SMc00093	0.83	+1.2
1,040,663	-		SMc00093	0.83	+2.4
1,040,663	-				-0.3
1,040,758	+		SMc00093	0.89	+0.8
1,040,758	+		SMc00093	0.89	+0.7
1,040,768	+		SMc00093	0.89	+1.4
1,040,768	+		SMc00093	0.89	+0.6
1,040,768	+		SMc00093	0.89	+1.6
1,040,768	+		SMc00093	0.89	+1.6
1,040,768	+		SMc00093	0.89	-0.0
1,040,768	+		SMc00093	0.89	+0.4
1,040,887	+				+1.9
1,041,111	-				+1.4
1,041,123	-				-1.2
1,041,187	+				-0.7
1,041,188	-				+2.1
1,041,208	+				+0.4
1,041,208	+				+0.2
1,041,208	+				+0.1
1,041,208	+				+0.1
1,041,209	-				-0.8
1,041,295	+				+1.1
1,041,295	+				+0.4
1,041,295	+				+0.6
1,041,296	-				-2.3
1,041,521	+		SMc00094	0.25	+0.8
1,041,522	-		SMc00094	0.25	+0.5
1,041,522	-		SMc00094	0.25	+0.5
1,041,523	+		SMc00094	0.25	-0.8
1,041,523	+		SMc00094	0.25	-0.1
1,041,523	+		SMc00094	0.25	+1.0
1,041,523	+		SMc00094	0.25	+0.1
1,041,523	+		SMc00094	0.25	+0.8
1,041,523	+		SMc00094	0.25	+0.6
1,041,523	+		SMc00094	0.25	+1.0
1,041,523	+		SMc00094	0.25	-1.0
1,041,523	+		SMc00094	0.25	+1.2
1,041,523	+		SMc00094	0.25	+1.4
1,041,523	+		SMc00094	0.25	+1.0
1,041,523	+		SMc00094	0.25	+0.7
1,041,523	+		SMc00094	0.25	+0.9
1,041,523	+		SMc00094	0.25	+0.1
1,041,524	-		SMc00094	0.25	+0.8
1,041,524	-		SMc00094	0.25	+0.4
1,041,524	-		SMc00094	0.25	+0.8
1,041,524	-		SMc00094	0.25	+0.1
1,041,524	-		SMc00094	0.25	+0.4
1,041,545	+		SMc00094	0.27	+0.7
1,041,545	+		SMc00094	0.27	-0.1
1,041,546	-		SMc00094	0.27	+0.3
1,041,605	-		SMc00094	0.31	+0.9
1,041,605	-		SMc00094	0.31	+0.7