Strain Fitness in Sinorhizobium meliloti 1021 around SMc00061
Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.3 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,095,315 | + | SMc00060 | 0.21 | -0.2 | |
1,095,446 | - | SMc00060 | 0.34 | -0.8 | |
1,095,446 | - | SMc00060 | 0.34 | -0.6 | |
1,095,446 | - | SMc00060 | 0.34 | -1.9 | |
1,095,446 | - | SMc00060 | 0.34 | -1.6 | |
1,095,529 | + | SMc00060 | 0.43 | -0.4 | |
1,095,529 | + | SMc00060 | 0.43 | -2.7 | |
1,095,529 | + | SMc00060 | 0.43 | -1.8 | |
1,095,529 | + | SMc00060 | 0.43 | -0.9 | |
1,095,530 | - | SMc00060 | 0.43 | -0.1 | |
1,095,530 | - | SMc00060 | 0.43 | -1.8 | |
1,095,609 | + | SMc00060 | 0.51 | -0.4 | |
1,095,610 | - | SMc00060 | 0.51 | -1.9 | |
1,095,610 | - | SMc00060 | 0.51 | -0.4 | |
1,096,311 | - | SMc00061 | 0.46 | +1.1 | |
1,096,351 | + | SMc00061 | 0.58 | +1.2 | |
1,096,351 | + | SMc00061 | 0.58 | -0.1 | |
1,096,352 | - | SMc00061 | 0.58 | +0.8 | |
1,096,453 | - | SMc00061 | 0.87 | +1.8 | |
1,096,496 | + | +0.0 | |||
1,096,497 | - | +0.2 | |||
1,096,497 | - | +0.5 | |||
1,096,685 | - | +1.8 | |||
1,096,708 | + | -2.6 | |||
1,096,708 | + | -0.8 | |||
1,096,728 | - | -0.2 | |||
1,096,743 | + | -0.1 | |||
1,096,744 | - | +0.4 | |||
1,096,744 | - | +2.3 | |||
1,096,744 | - | +0.5 | |||
1,096,744 | - | -2.2 | |||
1,096,744 | - | +1.7 |
Or see this region's nucleotide sequence