Strain Fitness in Sinorhizobium meliloti 1021 around SMa1678
Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.3 mg/ml |
---|---|---|---|---|---|
remove | |||||
942,037 | + | SMa1677 | 0.61 | -0.6 | |
942,037 | + | SMa1677 | 0.61 | -2.4 | |
942,037 | + | SMa1677 | 0.61 | +2.0 | |
942,037 | + | SMa1677 | 0.61 | -0.3 | |
942,037 | + | SMa1677 | 0.61 | +1.0 | |
942,038 | - | SMa1677 | 0.61 | +1.8 | |
942,116 | + | SMa1677 | 0.67 | +0.3 | |
942,325 | - | SMa1677 | 0.81 | +2.4 | |
942,693 | + | +0.2 | |||
942,792 | + | -1.0 | |||
942,793 | - | +1.4 | |||
942,801 | + | -2.8 | |||
942,801 | + | -0.5 | |||
942,802 | - | +1.8 | |||
942,802 | - | -0.5 | |||
942,819 | + | -1.4 | |||
942,855 | + | -0.5 | |||
942,860 | + | +1.1 | |||
942,860 | + | -2.8 | |||
942,861 | - | -1.8 | |||
942,861 | - | +1.0 | |||
942,862 | + | -1.3 | |||
942,864 | + | -1.0 | |||
942,864 | + | +0.4 | |||
942,865 | - | +0.0 | |||
942,865 | - | -0.3 | |||
942,872 | + | +0.4 | |||
943,353 | + | +2.1 | |||
943,354 | - | -0.2 | |||
943,354 | - | +0.1 | |||
943,417 | + | -0.8 | |||
943,443 | + | +1.8 | |||
943,525 | + | -1.4 | |||
943,810 | + | SMa1680 | 0.16 | -0.4 | |
943,953 | + | SMa1680 | 0.22 | -0.8 | |
943,953 | + | SMa1680 | 0.22 | +0.9 | |
943,963 | + | SMa1680 | 0.23 | +1.4 | |
943,963 | + | SMa1680 | 0.23 | -0.9 | |
944,005 | + | SMa1680 | 0.25 | -0.8 |
Or see this region's nucleotide sequence