Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0751 and SMa0752 are separated by 4 nucleotides SMa0752 and SMa0753 are separated by 295 nucleotides
SMa0751: SMa0751 - Ring-hydroxylating dioxygenase, at 404,204 to 405,442
SMa0751
SMa0752: SMa0752 - dioxygenase reductase subunit, at 405,447 to 406,508
SMa0752
SMa0753: SMa0753 - hypothetical protein, at 406,804 to 407,496
SMa0753
Position (kb) 405
406
407 Strain fitness (log2 ratio) -2
-1
0
1
2 at 404.540 kb on + strand, within SMa0751 at 404.540 kb on + strand, within SMa0751 at 404.540 kb on + strand, within SMa0751 at 404.648 kb on + strand, within SMa0751 at 404.648 kb on + strand, within SMa0751 at 404.649 kb on - strand, within SMa0751 at 404.649 kb on - strand, within SMa0751 at 404.650 kb on + strand, within SMa0751 at 404.651 kb on - strand, within SMa0751 at 404.708 kb on + strand, within SMa0751 at 404.755 kb on + strand, within SMa0751 at 404.810 kb on + strand, within SMa0751 at 404.899 kb on + strand, within SMa0751 at 404.899 kb on + strand, within SMa0751 at 404.900 kb on - strand, within SMa0751 at 404.900 kb on - strand, within SMa0751 at 404.992 kb on + strand, within SMa0751 at 405.021 kb on - strand, within SMa0751 at 405.023 kb on - strand, within SMa0751 at 405.023 kb on - strand, within SMa0751 at 405.023 kb on - strand, within SMa0751 at 405.105 kb on - strand, within SMa0751 at 405.158 kb on - strand, within SMa0751 at 405.205 kb on - strand, within SMa0751 at 405.234 kb on - strand, within SMa0751 at 405.389 kb on + strand at 405.390 kb on - strand at 405.636 kb on + strand, within SMa0752 at 405.636 kb on + strand, within SMa0752 at 405.636 kb on + strand, within SMa0752 at 405.637 kb on - strand, within SMa0752 at 405.637 kb on - strand, within SMa0752 at 405.637 kb on - strand, within SMa0752 at 405.638 kb on + strand, within SMa0752 at 405.733 kb on + strand, within SMa0752 at 405.733 kb on + strand, within SMa0752 at 405.734 kb on - strand, within SMa0752 at 405.734 kb on - strand, within SMa0752 at 405.737 kb on + strand, within SMa0752 at 405.737 kb on + strand, within SMa0752 at 405.737 kb on + strand, within SMa0752 at 405.738 kb on - strand, within SMa0752 at 406.077 kb on + strand, within SMa0752 at 406.118 kb on + strand, within SMa0752 at 406.118 kb on + strand, within SMa0752 at 406.119 kb on - strand, within SMa0752 at 406.309 kb on + strand, within SMa0752 at 406.379 kb on + strand, within SMa0752 at 406.379 kb on + strand, within SMa0752 at 406.380 kb on - strand, within SMa0752 at 406.380 kb on - strand, within SMa0752 at 406.380 kb on - strand, within SMa0752 at 406.409 kb on + strand at 406.410 kb on - strand at 406.410 kb on - strand at 406.456 kb on - strand at 406.456 kb on - strand at 406.456 kb on - strand at 406.457 kb on + strand at 406.457 kb on + strand at 406.457 kb on + strand at 406.458 kb on - strand at 406.458 kb on - strand at 406.492 kb on + strand at 406.493 kb on - strand at 406.506 kb on + strand at 406.507 kb on - strand at 406.745 kb on - strand at 406.930 kb on - strand, within SMa0753
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.3 mg/ml remove 404,540 + SMa0751 0.27 +0.2 404,540 + SMa0751 0.27 +0.1 404,540 + SMa0751 0.27 -0.6 404,648 + SMa0751 0.36 +0.0 404,648 + SMa0751 0.36 -0.7 404,649 - SMa0751 0.36 +0.7 404,649 - SMa0751 0.36 -0.1 404,650 + SMa0751 0.36 -0.5 404,651 - SMa0751 0.36 +0.4 404,708 + SMa0751 0.41 +0.1 404,755 + SMa0751 0.44 +0.1 404,810 + SMa0751 0.49 -0.3 404,899 + SMa0751 0.56 +0.3 404,899 + SMa0751 0.56 -0.6 404,900 - SMa0751 0.56 -0.7 404,900 - SMa0751 0.56 +1.6 404,992 + SMa0751 0.64 -0.1 405,021 - SMa0751 0.66 +0.2 405,023 - SMa0751 0.66 -0.1 405,023 - SMa0751 0.66 -0.3 405,023 - SMa0751 0.66 -0.1 405,105 - SMa0751 0.73 +0.3 405,158 - SMa0751 0.77 -0.2 405,205 - SMa0751 0.81 +0.3 405,234 - SMa0751 0.83 -1.5 405,389 + -1.2 405,390 - +0.6 405,636 + SMa0752 0.18 -1.8 405,636 + SMa0752 0.18 +0.7 405,636 + SMa0752 0.18 +0.1 405,637 - SMa0752 0.18 -0.3 405,637 - SMa0752 0.18 -1.3 405,637 - SMa0752 0.18 +0.7 405,638 + SMa0752 0.18 -0.2 405,733 + SMa0752 0.27 -0.9 405,733 + SMa0752 0.27 -1.1 405,734 - SMa0752 0.27 -0.5 405,734 - SMa0752 0.27 +0.8 405,737 + SMa0752 0.27 -0.1 405,737 + SMa0752 0.27 -1.1 405,737 + SMa0752 0.27 -2.5 405,738 - SMa0752 0.27 -0.7 406,077 + SMa0752 0.59 +1.2 406,118 + SMa0752 0.63 -0.3 406,118 + SMa0752 0.63 +1.0 406,119 - SMa0752 0.63 -0.5 406,309 + SMa0752 0.81 -0.9 406,379 + SMa0752 0.88 -0.3 406,379 + SMa0752 0.88 -0.1 406,380 - SMa0752 0.88 -0.8 406,380 - SMa0752 0.88 -2.3 406,380 - SMa0752 0.88 +0.0 406,409 + -0.2 406,410 - +0.1 406,410 - +1.2 406,456 - -0.8 406,456 - -0.5 406,456 - +1.0 406,457 + -0.4 406,457 + -0.9 406,457 + -0.4 406,458 - +0.6 406,458 - -0.5 406,492 + +0.1 406,493 - +2.0 406,506 + -2.1 406,507 - -0.3 406,745 - -0.8 406,930 - SMa0753 0.18 +0.4
Or see this region's nucleotide sequence