Strain Fitness in Sinorhizobium meliloti 1021 around SMa0433
Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.3 mg/ml |
---|---|---|---|---|---|
remove | |||||
232,863 | + | SMa0431 | 0.72 | +0.3 | |
233,176 | + | -1.0 | |||
233,184 | + | +0.0 | |||
233,218 | - | -0.2 | |||
233,342 | + | -0.8 | |||
233,414 | - | -0.2 | |||
233,414 | - | -0.3 | |||
233,419 | - | -0.9 | |||
233,603 | + | -0.2 | |||
233,604 | - | +0.6 | |||
233,698 | + | SMa0433 | 0.29 | +0.3 | |
233,704 | - | SMa0433 | 0.31 | +1.1 | |
234,087 | + | -0.5 | |||
234,087 | + | +0.4 | |||
234,087 | + | -2.9 | |||
234,088 | - | +0.3 | |||
234,194 | - | +0.8 | |||
234,194 | - | +0.1 | |||
234,286 | + | +0.4 | |||
234,287 | - | SMa0436 | 0.10 | -0.1 | |
234,287 | - | SMa0436 | 0.10 | -1.2 | |
234,359 | + | SMa0436 | 0.29 | +0.2 | |
234,359 | + | SMa0436 | 0.29 | -0.1 | |
234,360 | - | SMa0436 | 0.29 | -0.3 | |
234,366 | - | SMa0436 | 0.31 | -0.0 | |
234,366 | - | SMa0436 | 0.31 | +0.7 | |
234,372 | + | SMa0436 | 0.32 | +0.1 | |
234,373 | - | SMa0436 | 0.33 | -2.6 | |
234,403 | + | SMa0436 | 0.40 | +0.0 | |
234,403 | + | SMa0436 | 0.40 | -0.4 | |
234,410 | + | SMa0436 | 0.42 | -0.7 | |
234,492 | - | SMa0436 | 0.64 | -0.9 | |
234,592 | + | SMa0436 | 0.90 | +1.3 | |
234,593 | - | +0.2 | |||
234,715 | + | +0.7 | |||
234,725 | + | +0.2 | |||
234,726 | - | -0.1 | |||
234,726 | - | +0.0 | |||
234,742 | - | +1.2 | |||
234,747 | + | -0.1 | |||
234,755 | + | -0.6 | |||
234,755 | + | +0.2 | |||
234,756 | - | +0.7 | |||
234,883 | + | +0.1 | |||
234,884 | - | -0.3 | |||
234,884 | - | +0.8 | |||
234,925 | - | -1.0 | |||
234,976 | - | -2.3 | |||
234,976 | - | -1.4 | |||
235,011 | - | -0.4 |
Or see this region's nucleotide sequence