Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b22024 and SM_b21490 are separated by 135 nucleotides SM_b21490 and SM_b21491 are separated by 20 nucleotides SM_b21491 and SM_b21492 are separated by 242 nucleotides SM_b21492 and SM_b21493 are separated by 33 nucleotides
SM_b22024: SM_b22024 - cytochrome O ubiquinol oxidase CyoD, at 1,412,124 to 1,412,525
_b22024
SM_b21490: SM_b21490 - hypothetical protein, at 1,412,661 to 1,413,416
_b21490
SM_b21491: SM_b21491 - hypothetical protein, at 1,413,437 to 1,413,967
_b21491
SM_b21492: SM_b21492 - hypothetical protein, at 1,414,210 to 1,414,872
_b21492
SM_b21493: SM_b21493 - AsnC family transcriptional regulator, at 1,414,906 to 1,415,367
_b21493
Position (kb)
1413
1414 Strain fitness (log2 ratio)
-1
0
1
2 at 1412.566 kb on + strand at 1412.567 kb on - strand at 1412.632 kb on + strand at 1412.946 kb on + strand, within SM_b21490 at 1413.363 kb on + strand at 1413.364 kb on - strand at 1413.603 kb on + strand, within SM_b21491 at 1413.603 kb on + strand, within SM_b21491 at 1413.604 kb on - strand, within SM_b21491 at 1413.604 kb on - strand, within SM_b21491 at 1413.630 kb on + strand, within SM_b21491 at 1413.720 kb on + strand, within SM_b21491 at 1413.721 kb on - strand, within SM_b21491 at 1413.792 kb on + strand, within SM_b21491 at 1413.793 kb on - strand, within SM_b21491 at 1413.886 kb on - strand, within SM_b21491 at 1413.886 kb on - strand, within SM_b21491 at 1413.886 kb on - strand, within SM_b21491 at 1413.886 kb on - strand, within SM_b21491 at 1414.524 kb on + strand, within SM_b21492 at 1414.526 kb on + strand, within SM_b21492 at 1414.587 kb on - strand, within SM_b21492 at 1414.676 kb on + strand, within SM_b21492 at 1414.677 kb on - strand, within SM_b21492 at 1414.677 kb on - strand, within SM_b21492 at 1414.677 kb on - strand, within SM_b21492 at 1414.677 kb on - strand, within SM_b21492 at 1414.710 kb on - strand, within SM_b21492 at 1414.848 kb on + strand at 1414.889 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.3 mg/ml remove 1,412,566 + -1.4 1,412,567 - -0.1 1,412,632 + +0.3 1,412,946 + SM_b21490 0.38 +0.7 1,413,363 + -0.5 1,413,364 - -0.8 1,413,603 + SM_b21491 0.31 +0.8 1,413,603 + SM_b21491 0.31 +1.3 1,413,604 - SM_b21491 0.31 -0.3 1,413,604 - SM_b21491 0.31 +0.8 1,413,630 + SM_b21491 0.36 +1.0 1,413,720 + SM_b21491 0.53 +2.3 1,413,721 - SM_b21491 0.53 +1.1 1,413,792 + SM_b21491 0.67 -1.1 1,413,793 - SM_b21491 0.67 +0.4 1,413,886 - SM_b21491 0.85 +1.6 1,413,886 - SM_b21491 0.85 +0.9 1,413,886 - SM_b21491 0.85 +1.0 1,413,886 - SM_b21491 0.85 +1.5 1,414,524 + SM_b21492 0.47 -0.5 1,414,526 + SM_b21492 0.48 -0.1 1,414,587 - SM_b21492 0.57 -1.5 1,414,676 + SM_b21492 0.70 -1.4 1,414,677 - SM_b21492 0.70 -0.3 1,414,677 - SM_b21492 0.70 -1.1 1,414,677 - SM_b21492 0.70 -0.2 1,414,677 - SM_b21492 0.70 -0.4 1,414,710 - SM_b21492 0.75 +0.4 1,414,848 + +1.6 1,414,889 + -0.8
Or see this region's nucleotide sequence