Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21430 and SM_b21431 are separated by 126 nucleotides SM_b21431 and SM_b21432 are separated by 2 nucleotides SM_b21432 and SM_b21433 are separated by 105 nucleotides
SM_b21430: SM_b21430 - iron ABC transporter permease, at 1,360,613 to 1,361,683
_b21430
SM_b21431: SM_b21431 - hypothetical protein, at 1,361,810 to 1,362,232
_b21431
SM_b21432: SM_b21432 - iron uptake ABC transporter substrate-binding protein precursor, at 1,362,235 to 1,362,942
_b21432
SM_b21433: SM_b21433 - methyl-transferase, S-adenosyl-L-methionine (SAM)-MTase, at 1,363,048 to 1,363,857
_b21433
Position (kb)
1361
1362
1363 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1360.816 kb on + strand, within SM_b21430 at 1360.946 kb on - strand, within SM_b21430 at 1361.263 kb on + strand, within SM_b21430 at 1361.263 kb on + strand, within SM_b21430 at 1361.263 kb on + strand, within SM_b21430 at 1361.263 kb on + strand, within SM_b21430 at 1361.264 kb on - strand, within SM_b21430 at 1361.264 kb on - strand, within SM_b21430 at 1361.264 kb on - strand, within SM_b21430 at 1361.266 kb on - strand, within SM_b21430 at 1361.453 kb on + strand, within SM_b21430 at 1361.453 kb on + strand, within SM_b21430 at 1361.453 kb on + strand, within SM_b21430 at 1361.453 kb on + strand, within SM_b21430 at 1361.453 kb on + strand, within SM_b21430 at 1361.454 kb on - strand, within SM_b21430 at 1361.454 kb on - strand, within SM_b21430 at 1361.533 kb on - strand, within SM_b21430 at 1361.533 kb on - strand, within SM_b21430 at 1361.632 kb on - strand at 1361.750 kb on - strand at 1361.758 kb on + strand at 1361.758 kb on + strand at 1361.759 kb on - strand at 1361.759 kb on - strand at 1361.839 kb on - strand at 1361.851 kb on - strand at 1361.964 kb on + strand, within SM_b21431 at 1361.976 kb on + strand, within SM_b21431 at 1361.977 kb on - strand, within SM_b21431 at 1362.093 kb on + strand, within SM_b21431 at 1362.126 kb on + strand, within SM_b21431 at 1362.126 kb on + strand, within SM_b21431 at 1362.126 kb on + strand, within SM_b21431 at 1362.126 kb on + strand, within SM_b21431 at 1362.126 kb on + strand, within SM_b21431 at 1362.126 kb on + strand, within SM_b21431 at 1362.127 kb on - strand, within SM_b21431 at 1362.127 kb on - strand, within SM_b21431 at 1362.127 kb on - strand, within SM_b21431 at 1362.151 kb on + strand, within SM_b21431 at 1362.151 kb on + strand, within SM_b21431 at 1362.498 kb on - strand, within SM_b21432 at 1362.535 kb on - strand, within SM_b21432 at 1362.536 kb on + strand, within SM_b21432 at 1362.537 kb on - strand at 1362.537 kb on - strand, within SM_b21432 at 1362.684 kb on - strand, within SM_b21432 at 1362.693 kb on - strand, within SM_b21432 at 1362.779 kb on + strand, within SM_b21432 at 1362.779 kb on + strand, within SM_b21432 at 1362.779 kb on + strand, within SM_b21432 at 1362.895 kb on + strand at 1362.895 kb on + strand at 1363.003 kb on + strand at 1363.003 kb on + strand at 1363.075 kb on + strand at 1363.075 kb on + strand at 1363.102 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.3 mg/ml remove 1,360,816 + SM_b21430 0.19 -0.8 1,360,946 - SM_b21430 0.31 -0.6 1,361,263 + SM_b21430 0.61 +0.4 1,361,263 + SM_b21430 0.61 +1.8 1,361,263 + SM_b21430 0.61 +0.3 1,361,263 + SM_b21430 0.61 -2.6 1,361,264 - SM_b21430 0.61 -0.1 1,361,264 - SM_b21430 0.61 +0.3 1,361,264 - SM_b21430 0.61 +1.0 1,361,266 - SM_b21430 0.61 +2.2 1,361,453 + SM_b21430 0.78 -2.1 1,361,453 + SM_b21430 0.78 -1.0 1,361,453 + SM_b21430 0.78 -2.9 1,361,453 + SM_b21430 0.78 +0.2 1,361,453 + SM_b21430 0.78 +0.6 1,361,454 - SM_b21430 0.79 +1.1 1,361,454 - SM_b21430 0.79 -0.2 1,361,533 - SM_b21430 0.86 +0.1 1,361,533 - SM_b21430 0.86 +0.8 1,361,632 - -0.9 1,361,750 - +0.5 1,361,758 + +0.2 1,361,758 + +0.8 1,361,759 - -0.2 1,361,759 - +0.2 1,361,839 - +0.7 1,361,851 - -3.2 1,361,964 + SM_b21431 0.36 +0.6 1,361,976 + SM_b21431 0.39 +0.6 1,361,977 - SM_b21431 0.39 +0.7 1,362,093 + SM_b21431 0.67 +0.9 1,362,126 + SM_b21431 0.75 +0.4 1,362,126 + SM_b21431 0.75 +4.4 1,362,126 + SM_b21431 0.75 +0.6 1,362,126 + SM_b21431 0.75 +1.6 1,362,126 + SM_b21431 0.75 +0.5 1,362,126 + SM_b21431 0.75 -0.2 1,362,127 - SM_b21431 0.75 +0.1 1,362,127 - SM_b21431 0.75 +1.2 1,362,127 - SM_b21431 0.75 +0.3 1,362,151 + SM_b21431 0.81 -2.8 1,362,151 + SM_b21431 0.81 +1.0 1,362,498 - SM_b21432 0.37 +0.0 1,362,535 - SM_b21432 0.42 -0.0 1,362,536 + SM_b21432 0.43 -0.1 1,362,537 - +0.8 1,362,537 - SM_b21432 0.43 +1.5 1,362,684 - SM_b21432 0.63 +0.9 1,362,693 - SM_b21432 0.65 +1.7 1,362,779 + SM_b21432 0.77 +1.1 1,362,779 + SM_b21432 0.77 +1.4 1,362,779 + SM_b21432 0.77 +0.6 1,362,895 + -0.1 1,362,895 + +0.8 1,363,003 + +1.4 1,363,003 + +0.1 1,363,075 + -0.0 1,363,075 + +2.1 1,363,102 + -0.2
Or see this region's nucleotide sequence