Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21265 and SM_b21266 overlap by 4 nucleotides SM_b21266 and SM_b21267 are separated by 58 nucleotides SM_b21267 and SM_b21268 are separated by 151 nucleotides
SM_b21265: SM_b21265 - glycosyltransferase, at 838,365 to 839,612
_b21265
SM_b21266: SM_b21266 - hypothetical protein, at 839,609 to 840,796
_b21266
SM_b21267: SM_b21267 - hypothetical protein, at 840,855 to 841,532
_b21267
SM_b21268: SM_b21268 - hypothetical protein, at 841,684 to 842,397
_b21268
Position (kb) 839
840
841 Strain fitness (log2 ratio) -2
-1
0
1
2 at 838.785 kb on + strand, within SM_b21265 at 838.786 kb on - strand, within SM_b21265 at 838.795 kb on + strand, within SM_b21265 at 838.795 kb on + strand, within SM_b21265 at 838.795 kb on + strand, within SM_b21265 at 838.795 kb on + strand, within SM_b21265 at 838.796 kb on - strand, within SM_b21265 at 838.796 kb on - strand, within SM_b21265 at 838.850 kb on + strand, within SM_b21265 at 838.851 kb on - strand, within SM_b21265 at 838.918 kb on - strand, within SM_b21265 at 838.968 kb on + strand, within SM_b21265 at 838.969 kb on - strand, within SM_b21265 at 839.091 kb on + strand, within SM_b21265 at 839.153 kb on + strand at 839.154 kb on - strand, within SM_b21265 at 839.372 kb on + strand, within SM_b21265 at 839.373 kb on - strand, within SM_b21265 at 839.373 kb on - strand, within SM_b21265 at 839.375 kb on - strand, within SM_b21265 at 839.634 kb on - strand at 840.105 kb on + strand, within SM_b21266 at 840.106 kb on - strand, within SM_b21266 at 840.106 kb on - strand, within SM_b21266 at 840.137 kb on - strand, within SM_b21266 at 840.187 kb on + strand, within SM_b21266 at 840.339 kb on + strand, within SM_b21266 at 840.476 kb on + strand, within SM_b21266 at 840.476 kb on + strand, within SM_b21266 at 840.477 kb on - strand, within SM_b21266 at 840.477 kb on - strand, within SM_b21266 at 840.775 kb on + strand at 840.775 kb on + strand at 840.891 kb on + strand at 840.891 kb on + strand at 840.891 kb on + strand at 840.891 kb on + strand at 840.891 kb on + strand at 840.891 kb on + strand at 840.892 kb on - strand at 840.892 kb on - strand at 840.892 kb on - strand at 840.892 kb on - strand at 841.338 kb on + strand, within SM_b21267 at 841.339 kb on - strand, within SM_b21267 at 841.459 kb on + strand, within SM_b21267 at 841.459 kb on + strand, within SM_b21267 at 841.460 kb on - strand at 841.526 kb on + strand at 841.526 kb on + strand at 841.527 kb on - strand at 841.527 kb on - strand at 841.527 kb on - strand at 841.527 kb on - strand at 841.538 kb on + strand at 841.538 kb on + strand at 841.545 kb on + strand at 841.545 kb on + strand at 841.545 kb on + strand at 841.546 kb on - strand at 841.663 kb on + strand at 841.704 kb on + strand at 841.704 kb on + strand at 841.705 kb on - strand at 841.705 kb on - strand at 841.744 kb on + strand at 841.744 kb on + strand at 841.782 kb on - strand, within SM_b21268
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.3 mg/ml remove 838,785 + SM_b21265 0.34 -1.3 838,786 - SM_b21265 0.34 +0.9 838,795 + SM_b21265 0.34 +1.4 838,795 + SM_b21265 0.34 -1.2 838,795 + SM_b21265 0.34 +0.9 838,795 + SM_b21265 0.34 +1.0 838,796 - SM_b21265 0.35 +0.5 838,796 - SM_b21265 0.35 +0.3 838,850 + SM_b21265 0.39 +0.3 838,851 - SM_b21265 0.39 +0.4 838,918 - SM_b21265 0.44 +2.4 838,968 + SM_b21265 0.48 +0.6 838,969 - SM_b21265 0.48 +0.5 839,091 + SM_b21265 0.58 +2.1 839,153 + +1.3 839,154 - SM_b21265 0.63 -0.9 839,372 + SM_b21265 0.81 -1.7 839,373 - SM_b21265 0.81 +0.9 839,373 - SM_b21265 0.81 +0.4 839,375 - SM_b21265 0.81 +0.5 839,634 - +0.3 840,105 + SM_b21266 0.42 +2.0 840,106 - SM_b21266 0.42 -0.1 840,106 - SM_b21266 0.42 +1.2 840,137 - SM_b21266 0.44 +0.5 840,187 + SM_b21266 0.49 +0.4 840,339 + SM_b21266 0.61 +0.7 840,476 + SM_b21266 0.73 +0.1 840,476 + SM_b21266 0.73 -1.0 840,477 - SM_b21266 0.73 +1.3 840,477 - SM_b21266 0.73 +0.5 840,775 + -0.4 840,775 + -0.9 840,891 + +2.0 840,891 + -0.3 840,891 + -2.3 840,891 + +0.5 840,891 + -0.1 840,891 + -0.1 840,892 - +0.1 840,892 - -0.8 840,892 - -0.7 840,892 - -0.7 841,338 + SM_b21267 0.71 -0.5 841,339 - SM_b21267 0.71 -0.4 841,459 + SM_b21267 0.89 +0.1 841,459 + SM_b21267 0.89 +0.3 841,460 - +1.0 841,526 + +1.1 841,526 + -1.1 841,527 - -0.2 841,527 - -0.9 841,527 - +0.4 841,527 - -2.6 841,538 + +0.0 841,538 + -0.1 841,545 + -0.4 841,545 + -1.2 841,545 + -1.7 841,546 - +1.3 841,663 + -0.1 841,704 + +0.8 841,704 + -0.0 841,705 - +0.4 841,705 - +1.7 841,744 + -0.4 841,744 + +0.5 841,782 - SM_b21268 0.14 +0.0
Or see this region's nucleotide sequence