Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21085 and SM_b21086 are separated by 425 nucleotides SM_b21086 and SM_b21087 are separated by 144 nucleotides
SM_b21085: SM_b21085 - hypothetical protein, at 723,280 to 724,932
_b21085
SM_b21086: SM_b21086 - hypothetical protein, at 725,358 to 725,834
_b21086
SM_b21087: SM_b21087 - conjugal transfer protein, at 725,979 to 730,598
_b21087
Position (kb) 725
726 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 725.064 kb on + strand at 725.122 kb on + strand at 725.122 kb on + strand at 725.123 kb on - strand at 725.123 kb on - strand at 725.125 kb on + strand at 725.125 kb on + strand at 725.125 kb on + strand at 725.126 kb on - strand at 725.126 kb on - strand at 725.167 kb on - strand at 725.230 kb on + strand at 725.231 kb on - strand at 725.231 kb on - strand at 725.354 kb on + strand at 725.354 kb on + strand at 725.354 kb on + strand at 725.355 kb on - strand at 725.375 kb on - strand at 725.375 kb on - strand at 725.412 kb on + strand, within SM_b21086 at 725.412 kb on + strand, within SM_b21086 at 725.412 kb on + strand, within SM_b21086 at 725.413 kb on - strand, within SM_b21086 at 725.413 kb on - strand, within SM_b21086 at 725.413 kb on - strand, within SM_b21086 at 725.451 kb on + strand, within SM_b21086 at 725.452 kb on - strand, within SM_b21086 at 725.452 kb on - strand, within SM_b21086 at 725.452 kb on - strand, within SM_b21086 at 725.492 kb on - strand, within SM_b21086 at 725.496 kb on - strand, within SM_b21086 at 725.496 kb on - strand, within SM_b21086 at 725.506 kb on - strand, within SM_b21086 at 725.543 kb on - strand, within SM_b21086 at 725.543 kb on - strand, within SM_b21086 at 725.550 kb on + strand, within SM_b21086 at 725.550 kb on + strand, within SM_b21086 at 725.802 kb on + strand at 725.803 kb on - strand at 725.803 kb on - strand at 725.803 kb on - strand at 725.803 kb on - strand at 725.803 kb on - strand at 725.823 kb on + strand at 725.827 kb on + strand at 725.854 kb on - strand at 725.877 kb on - strand at 725.937 kb on - strand at 725.937 kb on - strand at 726.102 kb on + strand at 726.381 kb on + strand at 726.381 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.3 mg/ml remove 725,064 + -0.3 725,122 + +1.8 725,122 + -1.7 725,123 - -1.3 725,123 - -0.9 725,125 + -0.6 725,125 + +1.3 725,125 + -0.2 725,126 - +1.6 725,126 - -0.6 725,167 - +0.8 725,230 + -0.2 725,231 - +0.7 725,231 - -1.6 725,354 + +0.1 725,354 + -0.4 725,354 + -0.4 725,355 - +1.1 725,375 - -0.1 725,375 - +1.1 725,412 + SM_b21086 0.11 -0.8 725,412 + SM_b21086 0.11 -0.8 725,412 + SM_b21086 0.11 +1.2 725,413 - SM_b21086 0.12 -0.3 725,413 - SM_b21086 0.12 +0.0 725,413 - SM_b21086 0.12 -0.0 725,451 + SM_b21086 0.19 -0.3 725,452 - SM_b21086 0.20 -0.8 725,452 - SM_b21086 0.20 +0.5 725,452 - SM_b21086 0.20 -1.5 725,492 - SM_b21086 0.28 -1.7 725,496 - SM_b21086 0.29 +0.6 725,496 - SM_b21086 0.29 -1.0 725,506 - SM_b21086 0.31 +0.3 725,543 - SM_b21086 0.39 -0.9 725,543 - SM_b21086 0.39 -0.4 725,550 + SM_b21086 0.40 +0.2 725,550 + SM_b21086 0.40 -1.2 725,802 + +0.3 725,803 - +0.9 725,803 - +0.4 725,803 - +0.1 725,803 - -2.3 725,803 - -0.9 725,823 + +3.2 725,827 + -0.1 725,854 - +1.1 725,877 - +0.7 725,937 - -1.1 725,937 - +0.4 726,102 + -0.3 726,381 + -0.5 726,381 + -0.3
Or see this region's nucleotide sequence