Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20758
Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.3 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,550,162 | - | SM_b20757 | 0.55 | +0.3 | |
1,550,162 | - | SM_b20757 | 0.55 | -0.0 | |
1,550,164 | + | SM_b20757 | 0.55 | +0.1 | |
1,550,351 | - | SM_b20757 | 0.64 | +0.4 | |
1,550,351 | - | SM_b20757 | 0.64 | -0.3 | |
1,550,632 | - | SM_b20757 | 0.77 | +0.7 | |
1,550,635 | + | SM_b20757 | 0.77 | +0.1 | |
1,550,636 | - | SM_b20757 | 0.77 | +0.4 | |
1,550,647 | + | SM_b20757 | 0.78 | +1.1 | |
1,551,004 | + | +0.6 | |||
1,551,004 | + | -0.5 | |||
1,551,005 | - | +0.4 | |||
1,551,011 | - | -1.8 | |||
1,551,201 | + | -0.3 | |||
1,551,371 | - | SM_b20758 | 0.33 | -2.5 | |
1,551,409 | + | SM_b20758 | 0.38 | -3.1 | |
1,551,409 | + | SM_b20758 | 0.38 | -1.7 | |
1,551,410 | - | SM_b20758 | 0.38 | -1.3 | |
1,551,773 | - | SM_b20758 | 0.88 | +0.3 | |
1,551,823 | - | -1.7 | |||
1,551,944 | - | -0.6 | |||
1,552,478 | - | -0.1 | |||
1,552,479 | + | -0.0 | |||
1,552,661 | + | SM_b20760 | 0.34 | +0.4 | |
1,552,817 | - | SM_b20760 | 0.60 | +0.4 |
Or see this region's nucleotide sequence