Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20365 and SM_b20366 are separated by 177 nucleotides SM_b20366 and SM_b20367 are separated by 495 nucleotides
SM_b20365: SM_b20365 - iron ABC transporter substrate-binding protein, at 376,824 to 377,852
_b20365
SM_b20366: SM_b20366 - LacI family transcriptional regulator, at 378,030 to 379,034
_b20366
SM_b20367: SM_b20367 - transcriptional regulator, at 379,530 to 380,222
_b20367
Position (kb) 378
379
380 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 377.039 kb on - strand, within SM_b20365 at 377.275 kb on + strand, within SM_b20365 at 377.329 kb on + strand, within SM_b20365 at 377.330 kb on - strand, within SM_b20365 at 377.449 kb on + strand, within SM_b20365 at 377.473 kb on + strand, within SM_b20365 at 377.554 kb on + strand, within SM_b20365 at 377.554 kb on + strand, within SM_b20365 at 377.659 kb on + strand, within SM_b20365 at 377.659 kb on + strand, within SM_b20365 at 377.955 kb on - strand at 378.104 kb on + strand at 378.155 kb on - strand, within SM_b20366 at 378.236 kb on + strand, within SM_b20366 at 378.236 kb on + strand, within SM_b20366 at 378.262 kb on - strand, within SM_b20366 at 378.699 kb on + strand, within SM_b20366 at 378.888 kb on + strand, within SM_b20366 at 378.889 kb on - strand, within SM_b20366 at 378.889 kb on - strand, within SM_b20366 at 378.889 kb on - strand, within SM_b20366 at 378.920 kb on + strand, within SM_b20366 at 378.925 kb on + strand, within SM_b20366 at 378.926 kb on - strand, within SM_b20366 at 379.033 kb on - strand at 379.036 kb on + strand at 379.036 kb on + strand at 379.036 kb on + strand at 379.037 kb on - strand at 379.086 kb on - strand at 379.112 kb on - strand at 379.112 kb on - strand at 379.115 kb on - strand at 379.115 kb on - strand at 379.193 kb on + strand at 379.193 kb on + strand at 379.194 kb on - strand at 379.403 kb on - strand at 379.411 kb on + strand at 379.411 kb on + strand at 379.412 kb on - strand at 379.443 kb on - strand at 379.532 kb on - strand at 379.532 kb on - strand at 379.627 kb on + strand, within SM_b20367 at 379.732 kb on + strand, within SM_b20367 at 379.859 kb on - strand, within SM_b20367
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.3 mg/ml remove 377,039 - SM_b20365 0.21 -0.8 377,275 + SM_b20365 0.44 -1.5 377,329 + SM_b20365 0.49 -0.9 377,330 - SM_b20365 0.49 +1.6 377,449 + SM_b20365 0.61 +0.4 377,473 + SM_b20365 0.63 -1.4 377,554 + SM_b20365 0.71 -0.4 377,554 + SM_b20365 0.71 +0.2 377,659 + SM_b20365 0.81 +1.1 377,659 + SM_b20365 0.81 -0.6 377,955 - +0.3 378,104 + +0.1 378,155 - SM_b20366 0.12 +0.5 378,236 + SM_b20366 0.20 -0.2 378,236 + SM_b20366 0.20 +1.7 378,262 - SM_b20366 0.23 +1.2 378,699 + SM_b20366 0.67 +0.1 378,888 + SM_b20366 0.85 +0.0 378,889 - SM_b20366 0.85 +0.1 378,889 - SM_b20366 0.85 +1.1 378,889 - SM_b20366 0.85 -0.9 378,920 + SM_b20366 0.89 +0.4 378,925 + SM_b20366 0.89 +1.8 378,926 - SM_b20366 0.89 +0.9 379,033 - -0.7 379,036 + -0.2 379,036 + +0.5 379,036 + -1.2 379,037 - -0.5 379,086 - -1.8 379,112 - +0.7 379,112 - -2.3 379,115 - +0.4 379,115 - -1.4 379,193 + -0.0 379,193 + -0.3 379,194 - +0.1 379,403 - -0.3 379,411 + -0.1 379,411 + -0.4 379,412 - -2.7 379,443 - -3.3 379,532 - -2.1 379,532 - -0.8 379,627 + SM_b20367 0.14 -2.1 379,732 + SM_b20367 0.29 +1.4 379,859 - SM_b20367 0.47 +0.8
Or see this region's nucleotide sequence