Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20050
Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.3 mg/ml |
---|---|---|---|---|---|
remove | |||||
61,780 | + | SM_b20049 | 0.75 | -0.7 | |
61,780 | + | SM_b20049 | 0.75 | -0.5 | |
61,781 | - | SM_b20049 | 0.75 | +0.6 | |
61,903 | + | SM_b20049 | 0.81 | -0.1 | |
62,213 | - | -0.3 | |||
62,283 | + | +1.1 | |||
62,284 | - | -1.2 | |||
62,376 | + | -0.2 | |||
62,605 | + | SM_b20050 | 0.37 | -0.5 | |
62,606 | - | SM_b20050 | 0.37 | +1.4 | |
62,719 | - | SM_b20050 | 0.60 | +2.2 | |
62,977 | - | +0.1 | |||
62,999 | - | -1.5 | |||
62,999 | - | -0.9 | |||
62,999 | - | +0.2 | |||
63,066 | + | -1.0 | |||
63,066 | + | -0.4 | |||
63,066 | + | +0.9 | |||
63,066 | + | -0.5 | |||
63,067 | - | -0.3 | |||
63,067 | - | -0.5 | |||
63,099 | + | -2.2 | |||
63,110 | + | SM_b20054 | 0.11 | -0.3 | |
63,351 | + | SM_b20054 | 0.40 | -2.0 | |
63,352 | - | SM_b20054 | 0.40 | -0.8 | |
63,397 | - | SM_b20054 | 0.46 | +0.0 | |
63,699 | + | SM_b20054 | 0.82 | +0.5 | |
63,737 | + | SM_b20054 | 0.87 | -0.2 | |
63,737 | + | SM_b20054 | 0.87 | +0.3 | |
63,807 | + | +1.1 | |||
63,807 | + | -1.9 | |||
63,807 | + | +0.5 | |||
63,895 | + | +0.2 | |||
63,895 | + | +1.3 | |||
63,895 | + | +0.4 | |||
63,896 | - | -1.5 |
Or see this region's nucleotide sequence