Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20041
Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.3 mg/ml |
---|---|---|---|---|---|
remove | |||||
50,753 | + | SM_b20040 | 0.12 | -0.1 | |
50,754 | - | SM_b20040 | 0.12 | +0.3 | |
50,898 | - | SM_b20040 | 0.29 | -0.8 | |
51,136 | + | SM_b20040 | 0.56 | -1.7 | |
51,696 | + | +0.4 | |||
51,696 | + | -3.6 | |||
51,696 | + | -0.8 | |||
51,697 | - | +0.4 | |||
51,720 | - | -0.1 | |||
51,770 | + | SM_b20041 | 0.13 | -1.2 | |
51,925 | - | SM_b20041 | 0.42 | +0.2 | |
52,002 | + | SM_b20041 | 0.56 | -0.3 | |
52,012 | + | SM_b20041 | 0.58 | +1.5 | |
52,012 | + | SM_b20041 | 0.58 | -0.8 | |
52,012 | + | SM_b20041 | 0.58 | +0.2 | |
52,013 | - | SM_b20041 | 0.58 | -3.3 | |
52,165 | - | SM_b20041 | 0.87 | -1.2 | |
52,165 | - | SM_b20041 | 0.87 | -1.8 | |
52,606 | - | SM_b20042 | 0.30 | +1.0 | |
52,700 | - | SM_b20042 | 0.38 | -0.5 | |
52,700 | - | SM_b20042 | 0.38 | -2.0 | |
52,700 | - | SM_b20042 | 0.38 | -1.1 | |
52,700 | - | SM_b20042 | 0.38 | -0.3 | |
52,700 | - | SM_b20042 | 0.38 | -1.5 | |
53,213 | + | SM_b20042 | 0.83 | +1.5 |
Or see this region's nucleotide sequence