Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20021
Experiment: Paraquat dichloride 0.3 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.3 mg/ml |
---|---|---|---|---|---|
remove | |||||
28,597 | + | SM_b20020 | 0.60 | +0.2 | |
28,597 | + | SM_b20020 | 0.60 | +0.2 | |
28,781 | + | SM_b20020 | 0.69 | +0.3 | |
28,782 | - | SM_b20020 | 0.69 | -1.9 | |
28,843 | + | SM_b20020 | 0.72 | -1.2 | |
28,844 | - | SM_b20020 | 0.72 | +0.3 | |
28,844 | - | SM_b20020 | 0.72 | -0.3 | |
28,844 | - | SM_b20020 | 0.72 | +0.1 | |
28,982 | - | SM_b20020 | 0.79 | +0.5 | |
29,016 | - | SM_b20020 | 0.80 | -0.4 | |
29,016 | - | SM_b20020 | 0.80 | -1.5 | |
29,017 | + | SM_b20020 | 0.80 | -0.5 | |
29,194 | + | SM_b20020 | 0.89 | -1.7 | |
29,278 | + | -1.1 | |||
29,540 | - | -0.9 | |||
29,584 | - | -2.8 | |||
29,843 | + | SM_b20021 | 0.64 | -2.5 | |
29,987 | + | -0.5 | |||
29,987 | + | -0.4 | |||
29,988 | - | -1.3 | |||
30,008 | + | +0.9 | |||
30,170 | - | +0.6 | |||
30,170 | - | -0.9 | |||
30,189 | + | -1.0 | |||
30,189 | + | -0.2 | |||
30,189 | + | -0.6 | |||
30,190 | - | -1.5 | |||
30,196 | + | +0.3 | |||
30,196 | + | -1.1 | |||
30,197 | - | +0.7 | |||
30,370 | + | +1.5 | |||
30,371 | - | +0.4 | |||
30,371 | - | +1.7 | |||
30,471 | + | +0.3 | |||
30,471 | + | -1.7 | |||
30,471 | + | -0.8 | |||
30,471 | + | -1.4 | |||
30,471 | + | +0.6 | |||
30,472 | - | +0.1 |
Or see this region's nucleotide sequence