Strain Fitness in Ralstonia solanacearum IBSBF1503 around RALBFv3_RS21095

Experiment: CPG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	CPG
1,443,496	-				-0.5
1,443,496	-				+0.9
1,443,523	-				-0.7
1,443,685	+				-1.1
1,443,689	+				-0.6
1,443,738	+				+1.9
1,443,739	-				-0.3
1,443,837	+				-0.6
1,443,837	+				-1.4
1,443,978	-				-0.2
1,444,378	-				+0.0
1,444,550	+				+0.5
1,444,550	+				-0.1
1,444,550	+				-0.7
1,444,550	+				+0.0
1,444,551	-				+0.1
1,444,551	-				+0.6
1,444,551	-				+0.1
1,444,551	-				+1.2
1,444,551	-				-0.1
1,444,656	+		RALBFv3_RS21095	0.13	+1.2
1,444,657	-		RALBFv3_RS21095	0.13	-0.0
1,444,657	-		RALBFv3_RS21095	0.13	-0.0
1,444,674	+		RALBFv3_RS21095	0.14	-0.2
1,444,674	+		RALBFv3_RS21095	0.14	+0.0
1,444,674	+		RALBFv3_RS21095	0.14	-0.2
1,444,675	-		RALBFv3_RS21095	0.14	-0.1
1,444,675	-		RALBFv3_RS21095	0.14	+0.0
1,444,675	-		RALBFv3_RS21095	0.14	+0.1
1,444,732	+		RALBFv3_RS21095	0.16	-0.4
1,444,733	-		RALBFv3_RS21095	0.16	-0.1
1,444,878	+		RALBFv3_RS21095	0.23	+0.2
1,444,878	+		RALBFv3_RS21095	0.23	-1.4
1,444,878	+		RALBFv3_RS21095	0.23	-0.2
1,444,878	+		RALBFv3_RS21095	0.23	+1.4
1,444,879	-		RALBFv3_RS21095	0.23	-0.1
1,444,879	-		RALBFv3_RS21095	0.23	-0.1
1,444,885	+		RALBFv3_RS21095	0.23	-0.3
1,444,885	+		RALBFv3_RS21095	0.23	+0.7
1,444,885	+		RALBFv3_RS21095	0.23	+1.2
1,444,886	-		RALBFv3_RS21095	0.23	-0.8
1,444,886	-		RALBFv3_RS21095	0.23	-0.4
1,444,886	-		RALBFv3_RS21095	0.23	+1.1
1,444,920	+		RALBFv3_RS21095	0.25	-2.4
1,444,920	+		RALBFv3_RS21095	0.25	+0.4
1,444,920	+		RALBFv3_RS21095	0.25	+0.8
1,444,920	+		RALBFv3_RS21095	0.25	-2.1
1,444,920	+		RALBFv3_RS21095	0.25	+0.4
1,444,920	+		RALBFv3_RS21095	0.25	-0.5
1,444,920	+		RALBFv3_RS21095	0.25	+0.2
1,444,920	+		RALBFv3_RS21095	0.25	+0.6
1,444,920	+		RALBFv3_RS21095	0.25	+0.8
1,444,920	+		RALBFv3_RS21095	0.25	-0.2
1,444,920	+		RALBFv3_RS21095	0.25	-0.1
1,444,921	-		RALBFv3_RS21095	0.25	+0.3
1,444,921	-		RALBFv3_RS21095	0.25	-0.0
1,444,921	-		RALBFv3_RS21095	0.25	-0.1
1,444,921	-		RALBFv3_RS21095	0.25	+0.4
1,444,921	-		RALBFv3_RS21095	0.25	-0.1
1,444,921	-		RALBFv3_RS21095	0.25	-0.7
1,445,099	-		RALBFv3_RS21095	0.33	+0.2
1,445,224	-		RALBFv3_RS21095	0.38	-0.1
1,445,358	+		RALBFv3_RS21095	0.44	-1.7
1,445,358	+		RALBFv3_RS21095	0.44	-0.7
1,445,359	-		RALBFv3_RS21095	0.45	-0.4
1,445,359	-		RALBFv3_RS21095	0.45	+0.2
1,445,359	-		RALBFv3_RS21095	0.45	+0.6
1,445,359	-		RALBFv3_RS21095	0.45	+0.7
1,445,359	-		RALBFv3_RS21095	0.45	-0.1
1,445,379	+		RALBFv3_RS21095	0.45	-0.8
1,445,379	+		RALBFv3_RS21095	0.45	+0.8
1,445,379	+		RALBFv3_RS21095	0.45	+0.0
1,445,380	-		RALBFv3_RS21095	0.45	+0.3
1,445,380	-		RALBFv3_RS21095	0.45	-0.3
1,445,382	+		RALBFv3_RS21095	0.46	-0.0
1,445,382	+		RALBFv3_RS21095	0.46	+0.6
1,445,382	+		RALBFv3_RS21095	0.46	-0.0
1,445,382	+		RALBFv3_RS21095	0.46	+0.8
1,445,385	+		RALBFv3_RS21095	0.46	+0.5
1,445,385	+		RALBFv3_RS21095	0.46	+0.1
1,445,385	+		RALBFv3_RS21095	0.46	+0.1
1,445,386	-		RALBFv3_RS21095	0.46	+1.3
1,445,386	-		RALBFv3_RS21095	0.46	+0.1
1,445,386	-		RALBFv3_RS21095	0.46	+1.1
1,445,391	+		RALBFv3_RS21095	0.46	+1.2
1,445,391	+		RALBFv3_RS21095	0.46	+1.4
1,445,392	-		RALBFv3_RS21095	0.46	-1.0
1,445,448	+		RALBFv3_RS21095	0.49	+0.2
1,445,449	-		RALBFv3_RS21095	0.49	+0.9
1,445,449	-		RALBFv3_RS21095	0.49	-0.3
1,445,449	-		RALBFv3_RS21095	0.49	-0.1
1,445,449	-		RALBFv3_RS21095	0.49	+1.4
1,445,449	-		RALBFv3_RS21095	0.49	+0.2
1,445,449	-		RALBFv3_RS21095	0.49	+1.5
1,445,650	+		RALBFv3_RS21095	0.58	+0.4
1,445,740	-		RALBFv3_RS21095	0.62	-0.8
1,445,740	-		RALBFv3_RS21095	0.62	+0.9
1,445,743	+		RALBFv3_RS21095	0.62	-0.4
1,445,744	-		RALBFv3_RS21095	0.62	+0.3
1,445,744	-		RALBFv3_RS21095	0.62	-0.2
1,445,763	+		RALBFv3_RS21095	0.63	+0.1
1,445,763	+		RALBFv3_RS21095	0.63	+0.1
1,445,763	+		RALBFv3_RS21095	0.63	-0.0
1,445,764	-		RALBFv3_RS21095	0.63	+0.1
1,445,764	-		RALBFv3_RS21095	0.63	-0.1
1,445,764	-		RALBFv3_RS21095	0.63	+0.8
1,445,890	-		RALBFv3_RS21095	0.68	+1.0
1,445,890	-		RALBFv3_RS21095	0.68	+0.1
1,445,929	-		RALBFv3_RS21095	0.70	+0.1
1,445,940	+		RALBFv3_RS21095	0.71	-0.0
1,446,138	+		RALBFv3_RS21095	0.80	+1.1
1,446,139	-		RALBFv3_RS21095	0.80	+0.4
1,446,139	-		RALBFv3_RS21095	0.80	+0.9
1,446,158	+		RALBFv3_RS21095	0.80	+0.8
1,446,178	-		RALBFv3_RS21095	0.81	+0.3
1,446,178	-		RALBFv3_RS21095	0.81	-0.1
1,446,286	-		RALBFv3_RS21095	0.86	-0.0
1,446,286	-		RALBFv3_RS21095	0.86	+0.4
1,446,288	+		RALBFv3_RS21095	0.86	-0.2
1,446,288	+		RALBFv3_RS21095	0.86	-0.1
1,446,289	-		RALBFv3_RS21095	0.86	-1.0
1,446,289	-		RALBFv3_RS21095	0.86	+0.6
1,446,289	-		RALBFv3_RS21095	0.86	-1.7
1,446,300	+		RALBFv3_RS21095	0.87	-1.2
1,446,300	+		RALBFv3_RS21095	0.87	+0.6
1,446,301	-		RALBFv3_RS21095	0.87	+0.7
1,446,301	-		RALBFv3_RS21095	0.87	+0.2
1,446,394	+				-0.1
1,446,395	-				+0.9
1,446,395	-				+0.9
1,446,396	+				-0.3
1,446,396	+				-1.4
1,446,396	+				+0.1
1,446,397	-				+1.7
1,446,397	-				+1.9
1,446,426	+				-0.4
1,446,426	+				-0.4
1,446,426	+				-0.4
1,446,549	+				+0.6
1,446,549	+				+0.0
1,446,549	+				+0.0
1,447,173	+				-0.4
1,447,343	+		RALBFv3_RS21105	0.11	+1.2
1,447,344	-		RALBFv3_RS21105	0.11	-0.2
1,447,419	-		RALBFv3_RS21105	0.13	+0.3
1,447,544	+		RALBFv3_RS21105	0.17	+0.1
1,447,545	-		RALBFv3_RS21105	0.17	+0.5