Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03298

Experiment: PYE with perchlorate 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with perchlorate 50 mM
3,468,229	+		CCNA_03297	0.20	+1.7
3,468,235	+		CCNA_03297	0.20	+0.6
3,468,236	+		CCNA_03297	0.20	+0.9
3,468,237	-		CCNA_03297	0.20	-0.6
3,468,237	-		CCNA_03297	0.20	-1.3
3,468,238	-		CCNA_03297	0.20	+0.4
3,468,244	-		CCNA_03297	0.21	-1.6
3,468,244	-		CCNA_03297	0.21	+0.1
3,468,249	-		CCNA_03297	0.21	+0.5
3,468,253	+		CCNA_03297	0.22	+0.1
3,468,253	+		CCNA_03297	0.22	-1.5
3,468,253	+		CCNA_03297	0.22	-0.7
3,468,253	+		CCNA_03297	0.22	+0.7
3,468,261	-		CCNA_03297	0.22	-1.7
3,468,261	-		CCNA_03297	0.22	-2.5
3,468,261	-		CCNA_03297	0.22	-0.7
3,468,261	-		CCNA_03297	0.22	-0.7
3,468,261	-		CCNA_03297	0.22	-1.4
3,468,279	-		CCNA_03297	0.24	-0.7
3,468,286	-		CCNA_03297	0.25	-2.0
3,468,294	-		CCNA_03297	0.25	-0.4
3,468,314	+		CCNA_03297	0.27	-0.2
3,468,340	-		CCNA_03297	0.29	+0.2
3,468,357	-		CCNA_03297	0.31	+0.2
3,468,379	+		CCNA_03297	0.33	+0.2
3,468,478	-		CCNA_03297	0.42	+0.0
3,468,577	+		CCNA_03297	0.51	+0.9
3,468,586	-		CCNA_03297	0.52	-1.2
3,468,595	+		CCNA_03297	0.52	+0.5
3,468,601	-		CCNA_03297	0.53	+0.1
3,468,614	+		CCNA_03297	0.54	+0.8
3,468,636	+		CCNA_03297	0.56	+0.0
3,468,644	-		CCNA_03297	0.57	-1.4
3,468,644	-		CCNA_03297	0.57	+0.1
3,468,676	-		CCNA_03297	0.60	+0.7
3,468,711	-		CCNA_03297	0.63	-0.6
3,468,761	+		CCNA_03297	0.67	+1.3
3,468,761	+		CCNA_03297	0.67	-0.0
3,468,769	-		CCNA_03297	0.68	+0.0
3,468,826	+		CCNA_03297	0.73	-0.9
3,468,826	+		CCNA_03297	0.73	+3.0
3,468,826	+		CCNA_03297	0.73	-1.0
3,468,834	-		CCNA_03297	0.74	-1.5
3,468,834	-		CCNA_03297	0.74	+0.8
3,468,834	-		CCNA_03297	0.74	-1.8
3,468,834	-		CCNA_03297	0.74	+0.9
3,468,834	-		CCNA_03297	0.74	+2.8
3,468,834	-		CCNA_03297	0.74	+1.9
3,468,841	+		CCNA_03297	0.74	+1.2
3,468,856	-		CCNA_03297	0.76	-1.9
3,468,865	+		CCNA_03297	0.77	+1.2
3,468,873	-		CCNA_03297	0.77	-2.0
3,468,873	-		CCNA_03297	0.77	+0.7
3,468,873	-		CCNA_03297	0.77	-0.1
3,468,880	-		CCNA_03297	0.78	-0.3
3,468,885	-		CCNA_03297	0.78	-0.6
3,468,897	-		CCNA_03297	0.79	+0.2
3,468,927	-		CCNA_03297	0.82	-0.1
3,468,942	+		CCNA_03297	0.83	+0.9
3,468,963	+		CCNA_03297	0.85	+1.1
3,468,981	+		CCNA_03297	0.87	-0.9
3,468,989	-		CCNA_03297	0.88	+0.7
3,469,013	+		CCNA_03297	0.90	+1.4
3,469,013	+		CCNA_03297	0.90	+1.5
3,469,013	+		CCNA_03297	0.90	+1.4
3,469,013	+		CCNA_03297	0.90	+1.9
3,469,013	+		CCNA_03297	0.90	+0.9
3,469,013	+		CCNA_03297	0.90	+2.9
3,469,031	-				-1.5
3,469,039	+				+1.0
3,469,047	-				-1.1
3,469,097	+				+1.4
3,469,109	+				+1.4
3,469,120	+				+0.9
3,469,120	+				-0.6
3,469,120	+				+1.2
3,469,120	+				+1.6
3,469,120	+				+1.4
3,469,128	-				+1.4
3,469,159	+				-1.1
3,469,169	-				+1.8
3,469,195	+				+0.4
3,469,223	+				+1.9
3,469,223	+				+1.2
3,469,229	+				+0.5
3,469,231	-				+0.4
3,469,275	-				+0.7
3,469,286	-				+0.8
3,469,293	+				-0.6
3,469,296	-				-0.5
3,469,302	-				+0.3
3,469,321	-				+1.4
3,469,369	+				+0.8
3,469,372	-				-0.8
3,469,374	+				+1.3
3,469,375	+				-0.3
3,469,382	-				-0.9
3,469,382	-				-0.0
3,469,382	-				-0.6
3,469,387	-				-0.3
3,469,410	+				-1.9
3,469,436	+				-1.5
3,469,451	-				+0.7
3,469,467	+				+0.4
3,469,480	-				-1.0
3,469,480	-				-0.4
3,469,505	+				+2.2
3,469,511	+				-0.8
3,469,530	-				-0.9
3,469,535	-				-0.6
3,469,542	+				-0.8
3,469,601	-		CCNA_03298	0.12	+3.2
3,469,619	-		CCNA_03298	0.12	+1.4
3,469,624	+		CCNA_03298	0.12	-2.1
3,469,624	-		CCNA_03298	0.12	-0.1
3,469,630	+		CCNA_03298	0.13	-0.6
3,469,638	-		CCNA_03298	0.13	+0.1
3,469,638	-		CCNA_03298	0.13	-1.6
3,469,729	+		CCNA_03298	0.15	-0.8
3,469,798	-		CCNA_03298	0.18	-2.4
3,469,798	-		CCNA_03298	0.18	-0.6
3,469,798	-		CCNA_03298	0.18	+0.3
3,469,813	+		CCNA_03298	0.18	-1.8
3,469,830	+		CCNA_03298	0.18	+0.4
3,469,832	-		CCNA_03298	0.19	-1.3
3,469,850	-		CCNA_03298	0.19	-0.2
3,469,860	-		CCNA_03298	0.19	-0.5
3,469,865	-		CCNA_03298	0.20	-1.3
3,469,880	-		CCNA_03298	0.20	+0.3
3,469,896	-		CCNA_03298	0.20	+0.9
3,469,978	+		CCNA_03298	0.23	+0.2
3,469,979	+		CCNA_03298	0.23	+0.4
3,469,998	+		CCNA_03298	0.23	+0.7
3,470,113	+		CCNA_03298	0.27	+0.2
3,470,121	-		CCNA_03298	0.27	-0.4
3,470,126	+		CCNA_03298	0.27	-0.1
3,470,168	+		CCNA_03298	0.28	+1.1
3,470,168	+		CCNA_03298	0.28	-0.6
3,470,191	-		CCNA_03298	0.29	+1.2
3,470,191	-		CCNA_03298	0.29	-0.8
3,470,191	-		CCNA_03298	0.29	-1.2
3,470,204	-		CCNA_03298	0.30	+0.7
3,470,204	-		CCNA_03298	0.30	-0.6
3,470,218	-		CCNA_03298	0.30	+0.3
3,470,246	-		CCNA_03298	0.31	-2.1
3,470,248	-		CCNA_03298	0.31	+0.0
3,470,358	+		CCNA_03298	0.34	+0.4
3,470,358	+		CCNA_03298	0.34	-1.0
3,470,358	+		CCNA_03298	0.34	-1.1
3,470,366	-		CCNA_03298	0.34	-1.3
3,470,366	-		CCNA_03298	0.34	-1.0
3,470,378	-		CCNA_03298	0.35	-0.2
3,470,381	+		CCNA_03298	0.35	+0.3
3,470,381	+		CCNA_03298	0.35	-1.6
3,470,389	-		CCNA_03298	0.35	-2.2
3,470,391	+		CCNA_03298	0.35	-0.6
3,470,399	-		CCNA_03298	0.35	+0.2
3,470,405	+		CCNA_03298	0.35	-0.7
3,470,415	+		CCNA_03298	0.36	-0.2
3,470,481	+		CCNA_03298	0.38	+1.5
3,470,491	+		CCNA_03298	0.38	+0.1
3,470,497	+		CCNA_03298	0.38	+0.4
3,470,525	-		CCNA_03298	0.39	-1.3
3,470,541	+		CCNA_03298	0.40	+0.7
3,470,541	+		CCNA_03298	0.40	+0.2
3,470,546	+		CCNA_03298	0.40	-0.1
3,470,549	-		CCNA_03298	0.40	+0.0
3,470,569	+		CCNA_03298	0.40	-2.4
3,470,592	-		CCNA_03298	0.41	-0.5
3,470,619	-		CCNA_03298	0.42	-2.7
3,470,633	+		CCNA_03298	0.42	-0.9
3,470,641	-		CCNA_03298	0.42	+0.7
3,470,650	+		CCNA_03298	0.43	-2.0
3,470,655	+		CCNA_03298	0.43	-0.7
3,470,655	+		CCNA_03298	0.43	+1.7
3,470,658	-		CCNA_03298	0.43	-0.8
3,470,663	-		CCNA_03298	0.43	-1.6
3,470,663	-		CCNA_03298	0.43	-1.6
3,470,665	+		CCNA_03298	0.43	+1.5
3,470,691	+		CCNA_03298	0.44	-0.8
3,470,699	-		CCNA_03298	0.44	+0.1
3,470,725	-		CCNA_03298	0.45	-1.2
3,470,734	+		CCNA_03298	0.45	+0.9
3,470,736	-		CCNA_03298	0.45	-1.8
3,470,751	-		CCNA_03298	0.46	-0.8
3,470,771	-		CCNA_03298	0.46	+0.7
3,470,792	-		CCNA_03298	0.47	+1.7
3,470,793	+		CCNA_03298	0.47	-0.8
3,470,793	-		CCNA_03298	0.47	-0.1
3,470,806	+		CCNA_03298	0.47	-2.3
3,470,828	-		CCNA_03298	0.48	+0.2
3,470,838	+		CCNA_03298	0.48	-0.9
3,470,846	+		CCNA_03298	0.49	-1.3
3,470,851	+		CCNA_03298	0.49	-0.9
3,470,851	+		CCNA_03298	0.49	-1.7
3,470,859	-		CCNA_03298	0.49	+2.1
3,470,859	-		CCNA_03298	0.49	-1.1
3,470,923	-		CCNA_03298	0.51	-0.9
3,471,001	+		CCNA_03298	0.53	-2.3
3,471,009	-		CCNA_03298	0.53	-1.6
3,471,043	-		CCNA_03298	0.54	+0.1
3,471,061	+		CCNA_03298	0.55	+1.2
3,471,061	+		CCNA_03298	0.55	-0.0
3,471,077	-		CCNA_03298	0.55	-0.4
3,471,077	-		CCNA_03298	0.55	-1.3
3,471,079	-		CCNA_03298	0.55	+0.4
3,471,107	+		CCNA_03298	0.56	-1.3
3,471,130	+		CCNA_03298	0.57	-2.1
3,471,142	+		CCNA_03298	0.57	+2.2
3,471,181	+		CCNA_03298	0.58	-1.3
3,471,181	+		CCNA_03298	0.58	-2.1
3,471,196	+		CCNA_03298	0.59	-0.3
3,471,198	+		CCNA_03298	0.59	-1.3
3,471,199	+		CCNA_03298	0.59	-2.0
3,471,223	+		CCNA_03298	0.60	+1.9
3,471,223	-		CCNA_03298	0.60	-1.0
3,471,263	+		CCNA_03298	0.61	-1.2
3,471,268	+		CCNA_03298	0.61	+0.4
3,471,268	+		CCNA_03298	0.61	-0.3
3,471,268	+		CCNA_03298	0.61	-0.7
3,471,268	+		CCNA_03298	0.61	-1.7
3,471,271	-		CCNA_03298	0.61	-0.5
3,471,276	-		CCNA_03298	0.61	-0.9
3,471,276	-		CCNA_03298	0.61	+0.8
3,471,280	+		CCNA_03298	0.61	-0.9
3,471,280	+		CCNA_03298	0.61	-1.4
3,471,280	+		CCNA_03298	0.61	-0.8
3,471,293	-				+1.7
3,471,293	-		CCNA_03298	0.62	+0.1
3,471,295	-		CCNA_03298	0.62	-1.2
3,471,335	+		CCNA_03298	0.63	-1.5
3,471,343	-		CCNA_03298	0.63	-0.1
3,471,343	-		CCNA_03298	0.63	-0.1
3,471,348	-		CCNA_03298	0.63	-0.9
3,471,378	+		CCNA_03298	0.64	+0.3
3,471,383	+		CCNA_03298	0.64	-0.5
3,471,489	+		CCNA_03298	0.68	-1.0
3,471,499	+		CCNA_03298	0.68	-1.3
3,471,499	+		CCNA_03298	0.68	-1.1
3,471,502	-		CCNA_03298	0.68	-0.5
3,471,507	-		CCNA_03298	0.68	-1.7
3,471,507	-		CCNA_03298	0.68	-1.9
3,471,507	-		CCNA_03298	0.68	+1.9
3,471,522	-		CCNA_03298	0.69	+0.2
3,471,524	+		CCNA_03298	0.69	-1.8
3,471,550	-		CCNA_03298	0.69	-2.2
3,471,560	-		CCNA_03298	0.70	+1.7
3,471,560	-		CCNA_03298	0.70	-2.1
3,471,560	-		CCNA_03298	0.70	-0.1
3,471,560	-		CCNA_03298	0.70	-2.5
3,471,565	-		CCNA_03298	0.70	-1.4
3,471,577	+		CCNA_03298	0.70	-0.3
3,471,579	-		CCNA_03298	0.70	+0.9
3,471,654	-		CCNA_03298	0.72	+2.0
3,471,654	-		CCNA_03298	0.72	-2.1
3,471,656	+		CCNA_03298	0.73	-1.1
3,471,664	-		CCNA_03298	0.73	+1.0
3,471,715	-		CCNA_03298	0.74	-1.8
3,471,845	+		CCNA_03298	0.78	+0.1
3,471,860	+		CCNA_03298	0.79	+0.4
3,471,892	-		CCNA_03298	0.80	-1.0
3,471,900	+		CCNA_03298	0.80	-1.8
3,471,901	-		CCNA_03298	0.80	-2.5
3,471,908	-		CCNA_03298	0.80	-1.3
3,471,923	+		CCNA_03298	0.80	-0.1
3,471,953	-		CCNA_03298	0.81	+1.2
3,471,961	+		CCNA_03298	0.82	+0.4
3,471,961	+		CCNA_03298	0.82	+1.7
3,471,961	+		CCNA_03298	0.82	+1.2
3,471,969	-		CCNA_03298	0.82	+2.7
3,471,969	-		CCNA_03298	0.82	+1.7
3,471,987	-		CCNA_03298	0.82	-0.5
3,472,004	+		CCNA_03298	0.83	+0.9
3,472,004	-		CCNA_03298	0.83	-0.3
3,472,029	+		CCNA_03298	0.84	-0.5
3,472,044	-		CCNA_03298	0.84	-0.1
3,472,054	+		CCNA_03298	0.84	-0.5
3,472,118	-		CCNA_03298	0.86	-0.9
3,472,120	+		CCNA_03298	0.86	-0.8
3,472,120	+		CCNA_03298	0.86	-2.5
3,472,133	-		CCNA_03298	0.87	-0.6
3,472,133	-		CCNA_03298	0.87	-0.3
3,472,133	-		CCNA_03298	0.87	-0.6
3,472,146	+		CCNA_03298	0.87	-0.9
3,472,152	+		CCNA_03298	0.87	-2.4
3,472,155	-		CCNA_03298	0.87	-0.8
3,472,172	-		CCNA_03298	0.88	-0.6
3,472,172	-		CCNA_03298	0.88	-1.2
3,472,219	-		CCNA_03298	0.89	+0.5
3,472,292	+				-2.0
3,472,300	-				-0.4
3,472,302	+				-0.9
3,472,357	+				-0.4
3,472,511	+				-0.4
3,472,564	+				+0.8
3,472,578	-				+1.6
3,472,586	-				+0.6
3,472,586	-				-1.4
3,472,588	+				+0.8
3,472,596	-				-1.0
3,472,596	-				-1.6
3,472,609	+				+0.0
3,472,627	-				-0.7
3,472,628	-				+0.5
3,472,649	+				+0.3
3,472,654	+				+0.8
3,472,661	-				-1.5
3,472,670	-				+0.9
3,472,686	+				+1.3
3,472,755	-				-0.7
3,472,757	+				+1.2
3,472,762	+				+0.2
3,472,765	-				-0.9
3,472,774	+				+0.9
3,472,775	-				+0.6
3,472,776	-				+0.4
3,472,782	-				+0.7
3,472,833	+				-0.2
3,472,840	+				+0.1
3,472,854	+				+0.5
3,472,867	-				-1.6
3,472,876	+		CCNA_03299	0.11	-0.3
3,472,888	-		CCNA_03299	0.11	+0.5
3,472,895	+		CCNA_03299	0.12	+0.3
3,472,895	+		CCNA_03299	0.12	+0.7
3,472,903	-		CCNA_03299	0.12	-0.7
3,472,909	+		CCNA_03299	0.13	+1.4
3,472,928	-		CCNA_03299	0.14	+0.2
3,472,944	-		CCNA_03299	0.15	-0.5
3,472,951	+		CCNA_03299	0.15	-0.2
3,472,954	-		CCNA_03299	0.16	-0.6
3,472,970	+		CCNA_03299	0.17	+2.1
3,473,001	+		CCNA_03299	0.19	+0.5
3,473,041	-		CCNA_03299	0.21	-0.9
3,473,052	-		CCNA_03299	0.22	-0.6
3,473,052	-		CCNA_03299	0.22	+0.2
3,473,057	-		CCNA_03299	0.22	-0.3
3,473,098	+		CCNA_03299	0.25	-0.1
3,473,100	-		CCNA_03299	0.25	+1.3
3,473,119	-		CCNA_03299	0.27	+0.6
3,473,138	+		CCNA_03299	0.28	+0.2
3,473,138	+		CCNA_03299	0.28	+0.3
3,473,138	+		CCNA_03299	0.28	+0.2
3,473,158	+		CCNA_03299	0.29	+0.9
3,473,171	-		CCNA_03299	0.30	-0.6
3,473,236	+		CCNA_03299	0.34	+2.6
3,473,236	+		CCNA_03299	0.34	-0.4
3,473,244	+		CCNA_03299	0.35	+0.4
3,473,252	-		CCNA_03299	0.35	-1.1
3,473,252	-		CCNA_03299	0.35	-0.7
3,473,310	+		CCNA_03299	0.39	+0.6
3,473,310	+		CCNA_03299	0.39	+0.3
3,473,318	-		CCNA_03299	0.40	-0.7
3,473,318	-		CCNA_03299	0.40	-0.7
3,473,404	-		CCNA_03299	0.45	+1.1
3,473,429	+		CCNA_03299	0.47	+0.5
3,473,437	+		CCNA_03299	0.48	+0.8
3,473,456	+		CCNA_03299	0.49	+0.3
3,473,466	+		CCNA_03299	0.50	+1.7
3,473,481	-		CCNA_03299	0.51	-0.6
3,473,499	+		CCNA_03299	0.52	+0.5
3,473,499	+		CCNA_03299	0.52	+0.2
3,473,499	+		CCNA_03299	0.52	+0.7
3,473,521	+		CCNA_03299	0.53	-0.4
3,473,521	+		CCNA_03299	0.53	+0.3
3,473,521	+		CCNA_03299	0.53	-1.2
3,473,521	+		CCNA_03299	0.53	+0.9
3,473,521	+		CCNA_03299	0.53	+0.1
3,473,529	-		CCNA_03299	0.54	-0.7
3,473,529	-		CCNA_03299	0.54	+0.1
3,473,529	-		CCNA_03299	0.54	-2.8
3,473,529	-		CCNA_03299	0.54	-1.0
3,473,529	-		CCNA_03299	0.54	-1.8
3,473,568	+		CCNA_03299	0.56	+1.4
3,473,575	+		CCNA_03299	0.57	+0.9