Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00947

Experiment: PYE with perchlorate 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with perchlorate 50 mM
1,023,517	-		CCNA_00945	0.81	-0.2
1,023,517	-		CCNA_00945	0.81	-1.0
1,023,520	+		CCNA_00945	0.82	+2.0
1,023,528	-		CCNA_00945	0.83	-0.2
1,023,528	-		CCNA_00945	0.83	+0.1
1,023,552	+		CCNA_00945	0.86	+1.6
1,023,561	+		CCNA_00945	0.87	+2.8
1,023,561	+		CCNA_00945	0.87	+1.8
1,023,561	+		CCNA_00945	0.87	+1.7
1,023,571	+		CCNA_00945	0.89	+1.4
1,023,592	+				+2.1
1,023,592	+				+2.0
1,023,600	-				-2.0
1,023,610	+				+2.1
1,023,629	-				-0.7
1,023,656	-				+0.3
1,023,672	+				+2.0
1,023,675	-				+0.1
1,023,688	+				+2.0
1,023,704	-				-0.9
1,023,707	+				+1.7
1,023,729	-				-0.0
1,023,746	+		CCNA_00946	0.12	+1.7
1,023,761	-		CCNA_00946	0.14	-0.9
1,023,841	+		CCNA_00946	0.26	+1.8
1,023,849	+		CCNA_00946	0.27	+1.9
1,023,849	+		CCNA_00946	0.27	+2.6
1,023,849	+		CCNA_00946	0.27	+1.7
1,023,849	-		CCNA_00946	0.27	-1.2
1,023,870	+		CCNA_00946	0.30	+1.8
1,023,900	-		CCNA_00946	0.34	+0.3
1,023,914	+		CCNA_00946	0.36	+2.0
1,023,917	-		CCNA_00946	0.37	-1.6
1,023,917	-		CCNA_00946	0.37	+1.6
1,023,917	-		CCNA_00946	0.37	-0.3
1,023,919	+		CCNA_00946	0.37	-0.1
1,023,919	+		CCNA_00946	0.37	+0.9
1,023,919	+		CCNA_00946	0.37	+1.5
1,023,922	-		CCNA_00946	0.38	-0.8
1,023,927	-		CCNA_00946	0.38	-1.6
1,023,927	-		CCNA_00946	0.38	-0.9
1,023,982	-		CCNA_00946	0.46	+1.2
1,023,985	-		CCNA_00946	0.47	-2.0
1,024,020	-		CCNA_00946	0.52	-0.8
1,024,088	+		CCNA_00946	0.62	+1.9
1,024,088	+		CCNA_00946	0.62	+1.9
1,024,088	+		CCNA_00946	0.62	+1.8
1,024,096	-		CCNA_00946	0.63	+1.7
1,024,101	-		CCNA_00946	0.64	-0.3
1,024,125	+		CCNA_00946	0.67	+1.7
1,024,132	+		CCNA_00946	0.68	+1.4
1,024,140	+		CCNA_00946	0.69	+1.5
1,024,150	+		CCNA_00946	0.71	+1.7
1,024,266	+		CCNA_00946	0.88	+1.2
1,024,300	+				+1.1
1,024,303	-				-1.3
1,024,343	+				+2.0
1,024,343	+				+0.8
1,024,343	+				+0.5
1,024,351	+				-0.5
1,024,353	-				-2.2
1,024,356	+				-0.2
1,024,359	-				-1.2
1,024,364	-				+0.1
1,024,393	+				+0.7
1,024,393	+				+1.0
1,024,455	+				+1.7
1,024,455	+				-0.2
1,024,455	+				+0.7
1,024,458	-				+0.1
1,024,460	+				+0.4
1,024,463	+				+2.8
1,024,463	-				+0.1
1,024,471	+				+0.4
1,024,498	+				+3.2
1,024,498	+				+1.9
1,024,503	+				+1.4
1,024,526	+				+1.8
1,024,555	-				+1.1
1,024,584	+				+2.2
1,024,584	+				+1.5
1,024,584	+				+1.8
1,024,592	-				-0.6
1,024,612	+				+1.8
1,024,622	+				+2.1
1,024,654	-				+2.1
1,024,666	-				-0.8
1,024,679	+		CCNA_00947	0.10	+2.3
1,024,711	+		CCNA_00947	0.12	+2.3
1,024,711	+		CCNA_00947	0.12	+2.0
1,024,711	+		CCNA_00947	0.12	+2.1
1,024,719	-		CCNA_00947	0.13	-1.1
1,024,730	+		CCNA_00947	0.13	+1.7
1,024,859	-		CCNA_00947	0.20	+0.6
1,024,877	+		CCNA_00947	0.22	+2.3
1,024,920	+		CCNA_00947	0.24	+1.4
1,024,925	+		CCNA_00947	0.24	+4.4
1,024,954	+		CCNA_00947	0.26	+1.9
1,024,954	+		CCNA_00947	0.26	+2.0
1,024,962	-		CCNA_00947	0.26	-2.1
1,024,993	-		CCNA_00947	0.28	+0.3
1,024,995	-		CCNA_00947	0.28	+0.0
1,025,028	-		CCNA_00947	0.30	-0.8
1,025,032	+		CCNA_00947	0.30	+1.7
1,025,064	+		CCNA_00947	0.32	+2.1
1,025,124	+		CCNA_00947	0.35	+1.9
1,025,126	+		CCNA_00947	0.36	+2.1
1,025,126	+		CCNA_00947	0.36	+1.7
1,025,126	+		CCNA_00947	0.36	+2.1
1,025,134	-		CCNA_00947	0.36	-0.4
1,025,136	+		CCNA_00947	0.36	+1.6
1,025,137	+		CCNA_00947	0.36	+1.9
1,025,137	+		CCNA_00947	0.36	+2.0
1,025,137	+		CCNA_00947	0.36	+4.0
1,025,142	-		CCNA_00947	0.36	+1.2
1,025,257	+		CCNA_00947	0.43	+2.0
1,025,280	+		CCNA_00947	0.44	+2.5
1,025,315	+		CCNA_00947	0.46	+2.0
1,025,323	+		CCNA_00947	0.47	+2.2
1,025,325	+		CCNA_00947	0.47	+3.4
1,025,415	+		CCNA_00947	0.52	+2.1
1,025,423	-		CCNA_00947	0.52	-0.7
1,025,424	-		CCNA_00947	0.52	-0.0
1,025,425	-		CCNA_00947	0.52	-1.5
1,025,433	-		CCNA_00947	0.53	-1.1
1,025,433	-		CCNA_00947	0.53	-0.4
1,025,433	-		CCNA_00947	0.53	-0.7
1,025,450	+		CCNA_00947	0.54	+1.9
1,025,453	-		CCNA_00947	0.54	-2.4
1,025,463	+		CCNA_00947	0.55	+1.6
1,025,463	+		CCNA_00947	0.55	+1.5
1,025,465	-		CCNA_00947	0.55	-0.8
1,025,471	-		CCNA_00947	0.55	+0.8
1,025,504	-		CCNA_00947	0.57	-1.4
1,025,511	+		CCNA_00947	0.57	+1.6
1,025,511	+		CCNA_00947	0.57	+1.7
1,025,511	+		CCNA_00947	0.57	+2.9
1,025,511	+		CCNA_00947	0.57	+1.9
1,025,519	-		CCNA_00947	0.58	-2.6
1,025,531	+		CCNA_00947	0.58	+1.6
1,025,555	+		CCNA_00947	0.60	+1.1
1,025,563	-		CCNA_00947	0.60	+0.3
1,025,574	-		CCNA_00947	0.61	-0.2
1,025,586	-		CCNA_00947	0.61	+1.5
1,025,623	+		CCNA_00947	0.64	+1.9
1,025,623	+		CCNA_00947	0.64	+5.2
1,025,667	+		CCNA_00947	0.66	+2.2
1,025,686	+		CCNA_00947	0.67	+1.5
1,025,702	+		CCNA_00947	0.68	+1.8
1,025,830	+		CCNA_00947	0.75	+2.2
1,025,851	+		CCNA_00947	0.76	+1.7
1,025,852	+		CCNA_00947	0.76	+1.7
1,025,852	+		CCNA_00947	0.76	+2.3
1,025,862	+		CCNA_00947	0.77	+2.9
1,025,862	+		CCNA_00947	0.77	+1.5
1,025,870	+		CCNA_00947	0.77	+1.7
1,025,908	+		CCNA_00947	0.80	+1.8
1,025,925	-		CCNA_00947	0.81	-3.9
1,025,952	+		CCNA_00947	0.82	+1.8
1,025,952	+		CCNA_00947	0.82	+1.6
1,025,952	+		CCNA_00947	0.82	+2.4
1,026,019	+		CCNA_00947	0.86	+2.7
1,026,027	-		CCNA_00947	0.86	-1.1
1,026,028	+		CCNA_00947	0.86	+1.9
1,026,028	+		CCNA_00947	0.86	+2.4
1,026,028	+		CCNA_00947	0.86	+2.5
1,026,028	+		CCNA_00947	0.86	+2.3
1,026,036	-		CCNA_00947	0.87	-0.6
1,026,046	-		CCNA_00947	0.87	+0.7
1,026,067	+		CCNA_00947	0.89	+2.0
1,026,067	+		CCNA_00947	0.89	+2.0
1,026,070	-		CCNA_00947	0.89	+0.3
1,026,072	+		CCNA_00947	0.89	+2.2
1,026,080	+		CCNA_00947	0.89	+1.9
1,026,149	+				+2.0
1,026,149	+				+2.1
1,026,157	-				-1.7
1,026,170	+				+2.2
1,026,180	+				+1.9
1,026,180	+				+2.4
1,026,180	+				+1.9
1,026,182	+				+2.0
1,026,182	+				+1.8
1,026,182	+				+2.0
1,026,188	-				-0.0
1,026,190	-				-1.6
1,026,190	-				-1.9
1,026,334	-				-0.7
1,026,401	+				+1.0
1,026,429	+				+0.4
1,026,462	+				+1.7
1,026,487	+		CCNA_00948	0.17	+1.3
1,026,540	+		CCNA_00948	0.36	+0.1
1,026,594	+		CCNA_00948	0.55	+1.7
1,026,706	+				+0.3
1,026,711	+				+2.0
1,026,714	+				+0.1
1,026,724	+				+2.3
1,026,724	+				+2.0
1,026,729	-				-1.7
1,026,732	-				+1.0
1,026,733	+				+1.8
1,026,741	-				-0.9
1,026,798	-		CCNA_00949	0.25	-0.7
1,026,897	-		CCNA_00949	0.69	-0.2
1,026,899	+		CCNA_00949	0.70	+2.1
1,026,917	+		CCNA_00949	0.78	+0.4
1,026,967	-				-0.4
1,026,970	+				+0.8
1,026,970	+				+0.8
1,026,972	+				+0.4
1,026,972	+				+1.6
1,026,972	+				+0.2
1,026,972	+				+0.7
1,026,972	+				+0.9
1,026,972	+				+1.3
1,026,980	-				-1.8
1,026,980	-				-1.9
1,027,013	+				+0.9
1,027,071	+				+1.6
1,027,071	+				+2.1
1,027,105	+				+1.3
1,027,115	+				+1.2
1,027,115	+				+2.8
1,027,115	+				+1.0
1,027,120	+				+1.4
1,027,144	+				+2.1
1,027,152	-		CCNA_00950	0.10	+1.1
1,027,190	+		CCNA_00950	0.12	-0.8
1,027,213	+		CCNA_00950	0.14	+2.1
1,027,213	+		CCNA_00950	0.14	+2.2
1,027,213	+		CCNA_00950	0.14	+2.3
1,027,221	-		CCNA_00950	0.14	-0.7